Protein–RNA interactions for Protein: P0C0S8

HIST1H2AG, Histone H2A type 1, humanhuman

Predicted RBP Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AGP0C0S8 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.57■□□□□ 0.24
HIST1H2AGP0C0S8 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HIST1H2AGP0C0S8 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST1H2AGP0C0S8 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
HIST1H2AGP0C0S8 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST1H2AGP0C0S8 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
HIST1H2AGP0C0S8 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST1H2AGP0C0S8 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
HIST1H2AGP0C0S8 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.57■□□□□ 0.24
HIST1H2AGP0C0S8 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HIST1H2AGP0C0S8 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.57■□□□□ 0.24
HIST1H2AGP0C0S8 ELK2BP-201ENST00000415014 1224 ntBASIC16.57■□□□□ 0.24
HIST1H2AGP0C0S8 PAWRP1-201ENST00000451083 565 ntBASIC16.57■□□□□ 0.24
HIST1H2AGP0C0S8 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.57■□□□□ 0.24
HIST1H2AGP0C0S8 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.57■□□□□ 0.24
HIST1H2AGP0C0S8 AC136632.2-201ENST00000512891 861 ntBASIC16.57■□□□□ 0.24
HIST1H2AGP0C0S8 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST1H2AGP0C0S8 TP73-AS1-207ENST00000624167 988 ntBASIC16.57■□□□□ 0.24
HIST1H2AGP0C0S8 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
HIST1H2AGP0C0S8 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST1H2AGP0C0S8 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
HIST1H2AGP0C0S8 AGGF1P2-201ENST00000426656 2106 ntBASIC16.57■□□□□ 0.24
HIST1H2AGP0C0S8 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.57■□□□□ 0.24
HIST1H2AGP0C0S8 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HIST1H2AGP0C0S8 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HIST1H2AGP0C0S8 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.57■□□□□ 0.24
HIST1H2AGP0C0S8 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.57■□□□□ 0.24
HIST1H2AGP0C0S8 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.56■□□□□ 0.24
HIST1H2AGP0C0S8 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIST1H2AGP0C0S8 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIST1H2AGP0C0S8 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIST1H2AGP0C0S8 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HIST1H2AGP0C0S8 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.56■□□□□ 0.24
HIST1H2AGP0C0S8 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
HIST1H2AGP0C0S8 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HIST1H2AGP0C0S8 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
HIST1H2AGP0C0S8 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HIST1H2AGP0C0S8 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
HIST1H2AGP0C0S8 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.56■□□□□ 0.24
HIST1H2AGP0C0S8 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.56■□□□□ 0.24
HIST1H2AGP0C0S8 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
HIST1H2AGP0C0S8 RPS15P9-201ENST00000494093 319 ntBASIC16.56■□□□□ 0.24
HIST1H2AGP0C0S8 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.56■□□□□ 0.24
HIST1H2AGP0C0S8 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.56■□□□□ 0.24
HIST1H2AGP0C0S8 AC105339.3-201ENST00000560043 636 ntBASIC16.56■□□□□ 0.24
HIST1H2AGP0C0S8 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.56■□□□□ 0.24
HIST1H2AGP0C0S8 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.56■□□□□ 0.24
HIST1H2AGP0C0S8 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.56■□□□□ 0.24
HIST1H2AGP0C0S8 AC008735.5-201ENST00000623544 497 ntBASIC16.56■□□□□ 0.24
HIST1H2AGP0C0S8 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.56■□□□□ 0.24
HIST1H2AGP0C0S8 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIST1H2AGP0C0S8 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
HIST1H2AGP0C0S8 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
HIST1H2AGP0C0S8 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
HIST1H2AGP0C0S8 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
HIST1H2AGP0C0S8 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIST1H2AGP0C0S8 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
HIST1H2AGP0C0S8 AC084018.2-201ENST00000613093 2607 ntBASIC16.56■□□□□ 0.24
HIST1H2AGP0C0S8 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HIST1H2AGP0C0S8 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HIST1H2AGP0C0S8 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.56■□□□□ 0.24
HIST1H2AGP0C0S8 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
HIST1H2AGP0C0S8 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HIST1H2AGP0C0S8 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.55■□□□□ 0.24
HIST1H2AGP0C0S8 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIST1H2AGP0C0S8 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.55■□□□□ 0.24
HIST1H2AGP0C0S8 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIST1H2AGP0C0S8 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.55■□□□□ 0.24
HIST1H2AGP0C0S8 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIST1H2AGP0C0S8 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
HIST1H2AGP0C0S8 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.55■□□□□ 0.24
HIST1H2AGP0C0S8 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIST1H2AGP0C0S8 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIST1H2AGP0C0S8 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIST1H2AGP0C0S8 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
HIST1H2AGP0C0S8 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HIST1H2AGP0C0S8 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
HIST1H2AGP0C0S8 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HIST1H2AGP0C0S8 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIST1H2AGP0C0S8 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HIST1H2AGP0C0S8 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIST1H2AGP0C0S8 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HIST1H2AGP0C0S8 RNF216P1-203ENST00000404404 2427 ntBASIC16.55■□□□□ 0.24
HIST1H2AGP0C0S8 AL391256.1-201ENST00000443260 1855 ntBASIC16.55■□□□□ 0.24
HIST1H2AGP0C0S8 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HIST1H2AGP0C0S8 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HIST1H2AGP0C0S8 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
HIST1H2AGP0C0S8 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIST1H2AGP0C0S8 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
HIST1H2AGP0C0S8 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HIST1H2AGP0C0S8 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HIST1H2AGP0C0S8 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
HIST1H2AGP0C0S8 KRT18P27-201ENST00000427733 1299 ntBASIC16.55■□□□□ 0.24
HIST1H2AGP0C0S8 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.55■□□□□ 0.24
HIST1H2AGP0C0S8 AC079781.3-201ENST00000449110 356 ntBASIC16.55■□□□□ 0.24
HIST1H2AGP0C0S8 AC018712.1-201ENST00000455767 687 ntBASIC16.55■□□□□ 0.24
HIST1H2AGP0C0S8 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
HIST1H2AGP0C0S8 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.55■□□□□ 0.24
HIST1H2AGP0C0S8 DUX4L17-201ENST00000557360 1267 ntBASIC16.55■□□□□ 0.24
HIST1H2AGP0C0S8 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms