Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.06□□□□□ -0.16
CTSDP07339 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CTSDP07339 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTSDP07339 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC14.06□□□□□ -0.16
CTSDP07339 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTSDP07339 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CTSDP07339 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CTSDP07339 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CTSDP07339 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CTSDP07339 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTSDP07339 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTSDP07339 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTSDP07339 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
CTSDP07339 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTSDP07339 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
CTSDP07339 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.05□□□□□ -0.16
CTSDP07339 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CTSDP07339 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CTSDP07339 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC14.05□□□□□ -0.16
CTSDP07339 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC14.05□□□□□ -0.16
CTSDP07339 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CTSDP07339 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CTSDP07339 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CTSDP07339 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CTSDP07339 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CTSDP07339 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CTSDP07339 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC14.05□□□□□ -0.16
CTSDP07339 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.05□□□□□ -0.16
CTSDP07339 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
CTSDP07339 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC14.05□□□□□ -0.16
CTSDP07339 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CTSDP07339 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CTSDP07339 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CTSDP07339 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.05□□□□□ -0.16
CTSDP07339 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CTSDP07339 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.05□□□□□ -0.16
CTSDP07339 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CTSDP07339 HBZP1-201ENST00000354915 429 ntBASIC14.05□□□□□ -0.16
CTSDP07339 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CTSDP07339 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC14.05□□□□□ -0.16
CTSDP07339 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC14.05□□□□□ -0.16
CTSDP07339 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC14.05□□□□□ -0.16
CTSDP07339 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CTSDP07339 AC012306.2-201ENST00000609350 630 ntBASIC14.05□□□□□ -0.16
CTSDP07339 AL139011.1-202ENST00000642063 584 ntBASIC14.05□□□□□ -0.16
CTSDP07339 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.05□□□□□ -0.16
CTSDP07339 AC092384.3-202ENST00000564646 2873 ntBASIC14.05□□□□□ -0.16
CTSDP07339 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CTSDP07339 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
CTSDP07339 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CTSDP07339 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CTSDP07339 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CTSDP07339 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC14.05□□□□□ -0.16
CTSDP07339 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CTSDP07339 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CTSDP07339 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CTSDP07339 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CTSDP07339 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CTSDP07339 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CTSDP07339 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CTSDP07339 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.05□□□□□ -0.16
CTSDP07339 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CTSDP07339 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CTSDP07339 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CTSDP07339 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.04□□□□□ -0.16
CTSDP07339 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CTSDP07339 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CTSDP07339 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CTSDP07339 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CTSDP07339 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CTSDP07339 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CTSDP07339 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CTSDP07339 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CTSDP07339 AC005052.1-201ENST00000625181 2492 ntBASIC14.04□□□□□ -0.16
CTSDP07339 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CTSDP07339 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.04□□□□□ -0.16
CTSDP07339 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
CTSDP07339 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CTSDP07339 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CTSDP07339 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CTSDP07339 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CTSDP07339 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC14.04□□□□□ -0.16
CTSDP07339 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CTSDP07339 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CTSDP07339 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CTSDP07339 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CTSDP07339 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CTSDP07339 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC14.04□□□□□ -0.16
CTSDP07339 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CTSDP07339 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CTSDP07339 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CTSDP07339 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
CTSDP07339 AL137013.1-201ENST00000432946 1228 ntBASIC14.04□□□□□ -0.16
CTSDP07339 SNX5-210ENST00000481323 562 ntTSL 3 BASIC14.04□□□□□ -0.16
CTSDP07339 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC14.04□□□□□ -0.16
CTSDP07339 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC14.04□□□□□ -0.16
CTSDP07339 RNF126P1-202ENST00000569893 925 ntBASIC14.04□□□□□ -0.16
CTSDP07339 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC14.04□□□□□ -0.16
CTSDP07339 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC14.04□□□□□ -0.16
CTSDP07339 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms