Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DPB1P04440 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
HLA-DPB1P04440 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
HLA-DPB1P04440 IGHV3-52-201ENST00000519770 353 ntBASIC15.23■□□□□ 0.03
HLA-DPB1P04440 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DPB1P04440 AC011840.4-201ENST00000578471 627 ntBASIC15.23■□□□□ 0.03
HLA-DPB1P04440 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC15.23■□□□□ 0.03
HLA-DPB1P04440 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.23■□□□□ 0.03
HLA-DPB1P04440 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
HLA-DPB1P04440 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DPB1P04440 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DPB1P04440 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DPB1P04440 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
HLA-DPB1P04440 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.23■□□□□ 0.03
HLA-DPB1P04440 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DPB1P04440 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DPB1P04440 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DPB1P04440 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DPB1P04440 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DPB1P04440 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.23■□□□□ 0.03
HLA-DPB1P04440 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.23■□□□□ 0.03
HLA-DPB1P04440 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DPB1P04440 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
HLA-DPB1P04440 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DPB1P04440 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
HLA-DPB1P04440 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DPB1P04440 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DPB1P04440 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DPB1P04440 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DPB1P04440 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
HLA-DPB1P04440 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DPB1P04440 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.22■□□□□ 0.03
HLA-DPB1P04440 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DPB1P04440 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.22■□□□□ 0.03
HLA-DPB1P04440 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.22■□□□□ 0.03
HLA-DPB1P04440 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DPB1P04440 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.22■□□□□ 0.03
HLA-DPB1P04440 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DPB1P04440 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DPB1P04440 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15.22■□□□□ 0.03
HLA-DPB1P04440 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DPB1P04440 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DPB1P04440 COX5BP2-201ENST00000392354 334 ntBASIC15.22■□□□□ 0.03
HLA-DPB1P04440 UPK3BP1-201ENST00000428678 509 ntBASIC15.22■□□□□ 0.03
HLA-DPB1P04440 AP002383.4-201ENST00000442518 975 ntBASIC15.22■□□□□ 0.03
HLA-DPB1P04440 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.22■□□□□ 0.03
HLA-DPB1P04440 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DPB1P04440 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DPB1P04440 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DPB1P04440 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.22■□□□□ 0.03
HLA-DPB1P04440 AP002414.4-201ENST00000589764 1148 ntBASIC15.22■□□□□ 0.03
HLA-DPB1P04440 BCL10-202ENST00000620248 774 ntTSL 5 BASIC15.22■□□□□ 0.03
HLA-DPB1P04440 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC15.22■□□□□ 0.03
HLA-DPB1P04440 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DPB1P04440 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DPB1P04440 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DPB1P04440 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DPB1P04440 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DPB1P04440 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
HLA-DPB1P04440 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DPB1P04440 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.22■□□□□ 0.03
HLA-DPB1P04440 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DPB1P04440 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DPB1P04440 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
HLA-DPB1P04440 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DPB1P04440 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.22■□□□□ 0.03
HLA-DPB1P04440 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DPB1P04440 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DPB1P04440 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
HLA-DPB1P04440 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DPB1P04440 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.22■□□□□ 0.03
HLA-DPB1P04440 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DPB1P04440 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.21■□□□□ 0.03
HLA-DPB1P04440 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
HLA-DPB1P04440 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DPB1P04440 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
HLA-DPB1P04440 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.21■□□□□ 0.03
HLA-DPB1P04440 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DPB1P04440 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DPB1P04440 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DPB1P04440 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DPB1P04440 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DPB1P04440 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DPB1P04440 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DPB1P04440 AL845331.1-201ENST00000424978 1190 ntBASIC15.21■□□□□ 0.03
HLA-DPB1P04440 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC15.21■□□□□ 0.03
HLA-DPB1P04440 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
HLA-DPB1P04440 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DPB1P04440 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
HLA-DPB1P04440 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
HLA-DPB1P04440 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DPB1P04440 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DPB1P04440 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.21■□□□□ 0.03
HLA-DPB1P04440 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
HLA-DPB1P04440 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
HLA-DPB1P04440 AL356309.3-201ENST00000624132 1934 ntBASIC15.21■□□□□ 0.02
HLA-DPB1P04440 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HLA-DPB1P04440 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.21■□□□□ 0.02
HLA-DPB1P04440 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
HLA-DPB1P04440 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms