Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
APOC1P02654 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
APOC1P02654 AC105020.1-201ENST00000435356 2205 ntBASIC14.99□□□□□ -0.01
APOC1P02654 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.99□□□□□ -0.01
APOC1P02654 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.99□□□□□ -0.01
APOC1P02654 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOC1P02654 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC14.99□□□□□ -0.01
APOC1P02654 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC14.99□□□□□ -0.01
APOC1P02654 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
APOC1P02654 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
APOC1P02654 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC14.99□□□□□ -0.01
APOC1P02654 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
APOC1P02654 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOC1P02654 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC14.99□□□□□ -0.01
APOC1P02654 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOC1P02654 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
APOC1P02654 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOC1P02654 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOC1P02654 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
APOC1P02654 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
APOC1P02654 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOC1P02654 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC14.98□□□□□ -0.01
APOC1P02654 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC14.98□□□□□ -0.01
APOC1P02654 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
APOC1P02654 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.98□□□□□ -0.01
APOC1P02654 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOC1P02654 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC14.98□□□□□ -0.01
APOC1P02654 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC14.98□□□□□ -0.01
APOC1P02654 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.98□□□□□ -0.01
APOC1P02654 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
APOC1P02654 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
APOC1P02654 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC14.98□□□□□ -0.01
APOC1P02654 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.98□□□□□ -0.01
APOC1P02654 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
APOC1P02654 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
APOC1P02654 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.98□□□□□ -0.01
APOC1P02654 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
APOC1P02654 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.98□□□□□ -0.01
APOC1P02654 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
APOC1P02654 ARMC10P1-201ENST00000313754 855 ntBASIC14.98□□□□□ -0.01
APOC1P02654 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
APOC1P02654 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
APOC1P02654 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
APOC1P02654 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.98□□□□□ -0.01
APOC1P02654 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.98□□□□□ -0.01
APOC1P02654 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
APOC1P02654 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC14.98□□□□□ -0.01
APOC1P02654 RNF146-204ENST00000476956 884 ntTSL 2 BASIC14.98□□□□□ -0.01
APOC1P02654 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.98□□□□□ -0.01
APOC1P02654 AC010331.1-201ENST00000611423 582 ntBASIC14.98□□□□□ -0.01
APOC1P02654 AC073592.4-201ENST00000623827 446 ntBASIC14.98□□□□□ -0.01
APOC1P02654 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC14.98□□□□□ -0.01
APOC1P02654 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOC1P02654 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
APOC1P02654 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
APOC1P02654 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOC1P02654 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOC1P02654 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOC1P02654 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.98□□□□□ -0.01
APOC1P02654 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
APOC1P02654 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOC1P02654 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOC1P02654 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC14.98□□□□□ -0.01
APOC1P02654 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOC1P02654 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
APOC1P02654 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.98□□□□□ -0.01
APOC1P02654 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.98□□□□□ -0.01
APOC1P02654 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOC1P02654 AC092053.1-201ENST00000605787 1936 ntBASIC14.98□□□□□ -0.01
APOC1P02654 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
APOC1P02654 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.98□□□□□ -0.01
APOC1P02654 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOC1P02654 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
APOC1P02654 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.97□□□□□ -0.01
APOC1P02654 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.97□□□□□ -0.01
APOC1P02654 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
APOC1P02654 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
APOC1P02654 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.97□□□□□ -0.01
APOC1P02654 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
APOC1P02654 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
APOC1P02654 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.97□□□□□ -0.01
APOC1P02654 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
APOC1P02654 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.97□□□□□ -0.01
APOC1P02654 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
APOC1P02654 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
APOC1P02654 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
APOC1P02654 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
APOC1P02654 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
APOC1P02654 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
APOC1P02654 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.97□□□□□ -0.01
APOC1P02654 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC14.97□□□□□ -0.01
APOC1P02654 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.97□□□□□ -0.01
APOC1P02654 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
APOC1P02654 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
APOC1P02654 RBSN-204ENST00000449050 903 ntTSL 2 BASIC14.97□□□□□ -0.01
APOC1P02654 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC14.97□□□□□ -0.01
APOC1P02654 BET1L-206ENST00000486280 665 ntTSL 3 BASIC14.97□□□□□ -0.01
APOC1P02654 KRT18P35-201ENST00000510488 1269 ntBASIC14.97□□□□□ -0.01
APOC1P02654 FICD-205ENST00000552758 603 ntTSL 2 BASIC14.97□□□□□ -0.01
APOC1P02654 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms