Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.02■□□□□ 0.48
TIMP1P01033 AL033527.5-202ENST00000641632 1098 ntBASIC18.02■□□□□ 0.48
TIMP1P01033 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.02■□□□□ 0.47
TIMP1P01033 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TIMP1P01033 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TIMP1P01033 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.02■□□□□ 0.47
TIMP1P01033 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
TIMP1P01033 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TIMP1P01033 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
TIMP1P01033 BX323043.1-201ENST00000641006 1765 ntBASIC18.02■□□□□ 0.47
TIMP1P01033 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
TIMP1P01033 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.01■□□□□ 0.47
TIMP1P01033 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
TIMP1P01033 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
TIMP1P01033 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TIMP1P01033 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TIMP1P01033 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TIMP1P01033 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
TIMP1P01033 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TIMP1P01033 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TIMP1P01033 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
TIMP1P01033 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC18.01■□□□□ 0.47
TIMP1P01033 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TIMP1P01033 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TIMP1P01033 HIST1H2BPS3-201ENST00000419683 341 ntBASIC18.01■□□□□ 0.47
TIMP1P01033 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC18.01■□□□□ 0.47
TIMP1P01033 AC007389.4-201ENST00000454674 793 ntBASIC18.01■□□□□ 0.47
TIMP1P01033 FAM8A2P-201ENST00000528813 1142 ntBASIC18.01■□□□□ 0.47
TIMP1P01033 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
TIMP1P01033 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC18.01■□□□□ 0.47
TIMP1P01033 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC18.01■□□□□ 0.47
TIMP1P01033 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TIMP1P01033 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TIMP1P01033 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TIMP1P01033 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TIMP1P01033 KRT8P12-202ENST00000472924 1397 ntBASIC18.01■□□□□ 0.47
TIMP1P01033 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TIMP1P01033 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TIMP1P01033 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.01■□□□□ 0.47
TIMP1P01033 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TIMP1P01033 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
TIMP1P01033 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TIMP1P01033 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18■□□□□ 0.47
TIMP1P01033 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18■□□□□ 0.47
TIMP1P01033 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18■□□□□ 0.47
TIMP1P01033 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC18■□□□□ 0.47
TIMP1P01033 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18■□□□□ 0.47
TIMP1P01033 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18■□□□□ 0.47
TIMP1P01033 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18■□□□□ 0.47
TIMP1P01033 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
TIMP1P01033 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TIMP1P01033 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18■□□□□ 0.47
TIMP1P01033 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TIMP1P01033 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC18■□□□□ 0.47
TIMP1P01033 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC18■□□□□ 0.47
TIMP1P01033 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18■□□□□ 0.47
TIMP1P01033 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TIMP1P01033 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18■□□□□ 0.47
TIMP1P01033 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC18■□□□□ 0.47
TIMP1P01033 ORC6-206ENST00000568364 888 ntTSL 5 BASIC18■□□□□ 0.47
TIMP1P01033 NAA38-207ENST00000576861 556 ntTSL 3 BASIC18■□□□□ 0.47
TIMP1P01033 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC18■□□□□ 0.47
TIMP1P01033 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC18■□□□□ 0.47
TIMP1P01033 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18■□□□□ 0.47
TIMP1P01033 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TIMP1P01033 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TIMP1P01033 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18■□□□□ 0.47
TIMP1P01033 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18■□□□□ 0.47
TIMP1P01033 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TIMP1P01033 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18■□□□□ 0.47
TIMP1P01033 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
TIMP1P01033 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TIMP1P01033 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
TIMP1P01033 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TIMP1P01033 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TIMP1P01033 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.99■□□□□ 0.47
TIMP1P01033 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TIMP1P01033 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.99■□□□□ 0.47
TIMP1P01033 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
TIMP1P01033 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TIMP1P01033 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC17.99■□□□□ 0.47
TIMP1P01033 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.99■□□□□ 0.47
TIMP1P01033 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TIMP1P01033 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC17.99■□□□□ 0.47
TIMP1P01033 SNX29P1-201ENST00000548357 1007 ntBASIC17.99■□□□□ 0.47
TIMP1P01033 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC17.99■□□□□ 0.47
TIMP1P01033 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC17.99■□□□□ 0.47
TIMP1P01033 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.99■□□□□ 0.47
TIMP1P01033 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
TIMP1P01033 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TIMP1P01033 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC17.99■□□□□ 0.47
TIMP1P01033 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.99■□□□□ 0.47
TIMP1P01033 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TIMP1P01033 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TIMP1P01033 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TIMP1P01033 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.99■□□□□ 0.47
TIMP1P01033 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.99■□□□□ 0.47
TIMP1P01033 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC17.99■□□□□ 0.47
TIMP1P01033 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TIMP1P01033 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms