Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM3O75382 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM3O75382 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM3O75382 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
TRIM3O75382 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.8■□□□□ 0.12
TRIM3O75382 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.8■□□□□ 0.12
TRIM3O75382 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM3O75382 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM3O75382 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM3O75382 AL135999.2-201ENST00000622438 1686 ntBASIC15.8■□□□□ 0.12
TRIM3O75382 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.8■□□□□ 0.12
TRIM3O75382 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM3O75382 AC006504.4-201ENST00000592118 1568 ntBASIC15.8■□□□□ 0.12
TRIM3O75382 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM3O75382 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM3O75382 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM3O75382 AC016396.2-201ENST00000562575 1417 ntBASIC15.8■□□□□ 0.12
TRIM3O75382 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM3O75382 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.8■□□□□ 0.12
TRIM3O75382 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM3O75382 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM3O75382 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM3O75382 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM3O75382 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.8■□□□□ 0.12
TRIM3O75382 ELK2BP-201ENST00000415014 1224 ntBASIC15.8■□□□□ 0.12
TRIM3O75382 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM3O75382 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM3O75382 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.8■□□□□ 0.12
TRIM3O75382 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.8■□□□□ 0.12
TRIM3O75382 AC106730.1-201ENST00000566722 1090 ntBASIC15.8■□□□□ 0.12
TRIM3O75382 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM3O75382 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM3O75382 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM3O75382 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM3O75382 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TRIM3O75382 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM3O75382 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM3O75382 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM3O75382 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.8■□□□□ 0.12
TRIM3O75382 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
TRIM3O75382 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
TRIM3O75382 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.79■□□□□ 0.12
TRIM3O75382 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM3O75382 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TRIM3O75382 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM3O75382 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM3O75382 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TRIM3O75382 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM3O75382 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM3O75382 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM3O75382 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM3O75382 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM3O75382 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM3O75382 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM3O75382 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM3O75382 RNA5SP415-201ENST00000517246 115 ntBASIC15.79■□□□□ 0.12
TRIM3O75382 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.79■□□□□ 0.12
TRIM3O75382 AC005593.1-201ENST00000624894 515 ntBASIC15.79■□□□□ 0.12
TRIM3O75382 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM3O75382 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM3O75382 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM3O75382 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM3O75382 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TRIM3O75382 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM3O75382 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
TRIM3O75382 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM3O75382 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TRIM3O75382 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM3O75382 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM3O75382 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM3O75382 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.79■□□□□ 0.12
TRIM3O75382 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TRIM3O75382 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.79■□□□□ 0.12
TRIM3O75382 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TRIM3O75382 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM3O75382 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM3O75382 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM3O75382 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM3O75382 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM3O75382 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM3O75382 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM3O75382 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
TRIM3O75382 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.78■□□□□ 0.12
TRIM3O75382 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM3O75382 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
TRIM3O75382 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM3O75382 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM3O75382 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM3O75382 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TRIM3O75382 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM3O75382 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM3O75382 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.78■□□□□ 0.12
TRIM3O75382 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.78■□□□□ 0.12
TRIM3O75382 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.78■□□□□ 0.12
TRIM3O75382 UNC93B6-202ENST00000528242 690 ntBASIC15.78■□□□□ 0.12
TRIM3O75382 Z83851.2-201ENST00000609564 659 ntBASIC15.78■□□□□ 0.12
TRIM3O75382 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.78■□□□□ 0.12
TRIM3O75382 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM3O75382 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM3O75382 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms