Protein–RNA interactions for Protein: O00358

FOXE1, Forkhead box protein E1, humanhuman

Predicted RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXE1O00358 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.07■□□□□ 0.16
FOXE1O00358 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.07■□□□□ 0.16
FOXE1O00358 PCDHB19P-201ENST00000570871 2371 ntBASIC16.07■□□□□ 0.16
FOXE1O00358 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
FOXE1O00358 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FOXE1O00358 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.07■□□□□ 0.16
FOXE1O00358 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FOXE1O00358 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
FOXE1O00358 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
FOXE1O00358 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.07■□□□□ 0.16
FOXE1O00358 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.07■□□□□ 0.16
FOXE1O00358 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
FOXE1O00358 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
FOXE1O00358 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.07■□□□□ 0.16
FOXE1O00358 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.07■□□□□ 0.16
FOXE1O00358 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.07■□□□□ 0.16
FOXE1O00358 AC108073.2-201ENST00000464002 357 ntBASIC16.07■□□□□ 0.16
FOXE1O00358 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.07■□□□□ 0.16
FOXE1O00358 OR7E47P-204ENST00000575924 449 ntBASIC16.07■□□□□ 0.16
FOXE1O00358 CYP2A7P1-201ENST00000595391 815 ntBASIC16.07■□□□□ 0.16
FOXE1O00358 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.07■□□□□ 0.16
FOXE1O00358 AC004790.2-201ENST00000623588 572 ntBASIC16.07■□□□□ 0.16
FOXE1O00358 AC117500.6-201ENST00000624871 588 ntBASIC16.07■□□□□ 0.16
FOXE1O00358 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
FOXE1O00358 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.07■□□□□ 0.16
FOXE1O00358 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.07■□□□□ 0.16
FOXE1O00358 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
FOXE1O00358 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
FOXE1O00358 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FOXE1O00358 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
FOXE1O00358 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
FOXE1O00358 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
FOXE1O00358 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.07■□□□□ 0.16
FOXE1O00358 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FOXE1O00358 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FOXE1O00358 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
FOXE1O00358 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FOXE1O00358 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FOXE1O00358 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FOXE1O00358 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
FOXE1O00358 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
FOXE1O00358 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
FOXE1O00358 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
FOXE1O00358 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
FOXE1O00358 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
FOXE1O00358 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXE1O00358 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXE1O00358 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
FOXE1O00358 AL512652.2-201ENST00000625156 1716 ntBASIC16.06■□□□□ 0.16
FOXE1O00358 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
FOXE1O00358 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXE1O00358 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
FOXE1O00358 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.06■□□□□ 0.16
FOXE1O00358 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.06■□□□□ 0.16
FOXE1O00358 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXE1O00358 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.06■□□□□ 0.16
FOXE1O00358 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXE1O00358 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXE1O00358 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
FOXE1O00358 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXE1O00358 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
FOXE1O00358 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.06■□□□□ 0.16
FOXE1O00358 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.06■□□□□ 0.16
FOXE1O00358 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.06■□□□□ 0.16
FOXE1O00358 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXE1O00358 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.06■□□□□ 0.16
FOXE1O00358 AL662844.1-201ENST00000546340 181 ntBASIC16.06■□□□□ 0.16
FOXE1O00358 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.06■□□□□ 0.16
FOXE1O00358 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.06■□□□□ 0.16
FOXE1O00358 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.06■□□□□ 0.16
FOXE1O00358 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.06■□□□□ 0.16
FOXE1O00358 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.06■□□□□ 0.16
FOXE1O00358 AC010654.1-201ENST00000615722 808 ntBASIC16.06■□□□□ 0.16
FOXE1O00358 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
FOXE1O00358 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
FOXE1O00358 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
FOXE1O00358 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXE1O00358 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXE1O00358 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.06■□□□□ 0.16
FOXE1O00358 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
FOXE1O00358 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.06■□□□□ 0.16
FOXE1O00358 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
FOXE1O00358 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.05■□□□□ 0.16
FOXE1O00358 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXE1O00358 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXE1O00358 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
FOXE1O00358 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXE1O00358 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXE1O00358 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXE1O00358 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXE1O00358 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
FOXE1O00358 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.05■□□□□ 0.16
FOXE1O00358 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.05■□□□□ 0.16
FOXE1O00358 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.05■□□□□ 0.16
FOXE1O00358 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.05■□□□□ 0.16
FOXE1O00358 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FOXE1O00358 TPM4P1-201ENST00000436100 807 ntBASIC16.05■□□□□ 0.16
FOXE1O00358 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.05■□□□□ 0.16
FOXE1O00358 AC092910.1-201ENST00000482027 1129 ntBASIC16.05■□□□□ 0.16
FOXE1O00358 AC093909.1-201ENST00000504731 1122 ntBASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms