Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.57■□□□□ 0.24
CDC7O00311 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.57■□□□□ 0.24
CDC7O00311 AL805961.1-202ENST00000641562 540 ntBASIC16.57■□□□□ 0.24
CDC7O00311 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.57■□□□□ 0.24
CDC7O00311 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDC7O00311 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDC7O00311 AC092364.2-201ENST00000596710 2692 ntBASIC16.57■□□□□ 0.24
CDC7O00311 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.57■□□□□ 0.24
CDC7O00311 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDC7O00311 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDC7O00311 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDC7O00311 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDC7O00311 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDC7O00311 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDC7O00311 CROCCP1-201ENST00000426910 5675 ntBASIC16.56■□□□□ 0.24
CDC7O00311 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDC7O00311 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDC7O00311 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDC7O00311 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDC7O00311 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDC7O00311 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDC7O00311 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CDC7O00311 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
CDC7O00311 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDC7O00311 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.56■□□□□ 0.24
CDC7O00311 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDC7O00311 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDC7O00311 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.56■□□□□ 0.24
CDC7O00311 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.56■□□□□ 0.24
CDC7O00311 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.56■□□□□ 0.24
CDC7O00311 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.56■□□□□ 0.24
CDC7O00311 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDC7O00311 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDC7O00311 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDC7O00311 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CDC7O00311 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.56■□□□□ 0.24
CDC7O00311 KRT18P27-201ENST00000427733 1299 ntBASIC16.56■□□□□ 0.24
CDC7O00311 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.56■□□□□ 0.24
CDC7O00311 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.56■□□□□ 0.24
CDC7O00311 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.56■□□□□ 0.24
CDC7O00311 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDC7O00311 AC013467.2-201ENST00000605472 835 ntBASIC16.56■□□□□ 0.24
CDC7O00311 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDC7O00311 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.56■□□□□ 0.24
CDC7O00311 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
CDC7O00311 REXO1L3P-201ENST00000622202 1288 ntBASIC16.56■□□□□ 0.24
CDC7O00311 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.56■□□□□ 0.24
CDC7O00311 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.56■□□□□ 0.24
CDC7O00311 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDC7O00311 AC006449.5-201ENST00000610658 2098 ntBASIC16.56■□□□□ 0.24
CDC7O00311 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.56■□□□□ 0.24
CDC7O00311 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDC7O00311 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDC7O00311 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.56■□□□□ 0.24
CDC7O00311 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDC7O00311 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDC7O00311 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.56■□□□□ 0.24
CDC7O00311 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CDC7O00311 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CDC7O00311 AC006538.1-201ENST00000567905 1585 ntBASIC16.55■□□□□ 0.24
CDC7O00311 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CDC7O00311 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDC7O00311 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDC7O00311 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CDC7O00311 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.55■□□□□ 0.24
CDC7O00311 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.55■□□□□ 0.24
CDC7O00311 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDC7O00311 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDC7O00311 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDC7O00311 AC073621.1-201ENST00000392730 636 ntBASIC16.55■□□□□ 0.24
CDC7O00311 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.55■□□□□ 0.24
CDC7O00311 HNRNPDP1-201ENST00000439535 754 ntBASIC16.55■□□□□ 0.24
CDC7O00311 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.55■□□□□ 0.24
CDC7O00311 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.55■□□□□ 0.24
CDC7O00311 AC073648.2-201ENST00000510116 352 ntBASIC16.55■□□□□ 0.24
CDC7O00311 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDC7O00311 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.55■□□□□ 0.24
CDC7O00311 AF228730.7-201ENST00000641842 219 ntBASIC16.55■□□□□ 0.24
CDC7O00311 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDC7O00311 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDC7O00311 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDC7O00311 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDC7O00311 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDC7O00311 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDC7O00311 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDC7O00311 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDC7O00311 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.55■□□□□ 0.24
CDC7O00311 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDC7O00311 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.55■□□□□ 0.24
CDC7O00311 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDC7O00311 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.55■□□□□ 0.24
CDC7O00311 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.55■□□□□ 0.24
CDC7O00311 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.54■□□□□ 0.24
CDC7O00311 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.54■□□□□ 0.24
CDC7O00311 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDC7O00311 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.54■□□□□ 0.24
CDC7O00311 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.54■□□□□ 0.24
CDC7O00311 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
CDC7O00311 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDC7O00311 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms