Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 KRT18P20-201ENST00000548986 1279 ntBASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 PCDHA4-204ENST00000618834 10557 ntBASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 NEXMIF-201ENST00000055682 11719 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 PCNX2-203ENST00000344698 5348 ntAPPRIS ALT2 TSL 2 BASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 NFYC-AS1-201ENST00000606277 1687 ntBASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 PCDHGA12-201ENST00000252085 4747 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 TNS3-201ENST00000311160 7618 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 MTMR9LP-203ENST00000426597 1545 ntBASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 KCNH1-209ENST00000639952 8075 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 NDST1-201ENST00000261797 8030 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
CHKB-CPT1BH3BT56 PGR-210ENST00000619228 3038 ntTSL 5 BASIC9.34□□□□□ -0.91
CHKB-CPT1BH3BT56 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC9.34□□□□□ -0.91
CHKB-CPT1BH3BT56 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
CHKB-CPT1BH3BT56 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC9.34□□□□□ -0.91
CHKB-CPT1BH3BT56 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC9.34□□□□□ -0.91
CHKB-CPT1BH3BT56 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC9.34□□□□□ -0.91
CHKB-CPT1BH3BT56 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
CHKB-CPT1BH3BT56 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
CHKB-CPT1BH3BT56 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
CHKB-CPT1BH3BT56 FHDC1-201ENST00000260008 6480 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
CHKB-CPT1BH3BT56 AC241952.1-201ENST00000612480 6897 ntBASIC9.34□□□□□ -0.91
CHKB-CPT1BH3BT56 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC9.34□□□□□ -0.91
CHKB-CPT1BH3BT56 SLC38A1-201ENST00000398637 8066 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
CHKB-CPT1BH3BT56 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
CHKB-CPT1BH3BT56 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
CHKB-CPT1BH3BT56 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
CHKB-CPT1BH3BT56 NFASC-206ENST00000404076 5728 ntTSL 5 BASIC9.34□□□□□ -0.91
CHKB-CPT1BH3BT56 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
CHKB-CPT1BH3BT56 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
CHKB-CPT1BH3BT56 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
CHKB-CPT1BH3BT56 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC9.34□□□□□ -0.91
CHKB-CPT1BH3BT56 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
CHKB-CPT1BH3BT56 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
CHKB-CPT1BH3BT56 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
CHKB-CPT1BH3BT56 AC004817.3-201ENST00000602957 2129 ntBASIC9.34□□□□□ -0.91
CHKB-CPT1BH3BT56 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC9.34□□□□□ -0.91
CHKB-CPT1BH3BT56 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
CHKB-CPT1BH3BT56 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
CHKB-CPT1BH3BT56 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC9.34□□□□□ -0.91
CHKB-CPT1BH3BT56 AC073347.1-201ENST00000421633 2643 ntBASIC9.34□□□□□ -0.91
CHKB-CPT1BH3BT56 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
CHKB-CPT1BH3BT56 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC9.34□□□□□ -0.91
CHKB-CPT1BH3BT56 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC9.34□□□□□ -0.91
CHKB-CPT1BH3BT56 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC9.34□□□□□ -0.91
CHKB-CPT1BH3BT56 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
CHKB-CPT1BH3BT56 AP001160.3-201ENST00000601484 763 ntBASIC9.34□□□□□ -0.91
CHKB-CPT1BH3BT56 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
CHKB-CPT1BH3BT56 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC9.34□□□□□ -0.91
CHKB-CPT1BH3BT56 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
CHKB-CPT1BH3BT56 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
CHKB-CPT1BH3BT56 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
CHKB-CPT1BH3BT56 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
CHKB-CPT1BH3BT56 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC9.34□□□□□ -0.91
CHKB-CPT1BH3BT56 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
CHKB-CPT1BH3BT56 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
CHKB-CPT1BH3BT56 AC010327.5-201ENST00000586923 3061 ntBASIC9.34□□□□□ -0.91
CHKB-CPT1BH3BT56 DNMT1-201ENST00000340748 5408 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
CHKB-CPT1BH3BT56 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
CHKB-CPT1BH3BT56 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
CHKB-CPT1BH3BT56 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
CHKB-CPT1BH3BT56 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC9.34□□□□□ -0.91
CHKB-CPT1BH3BT56 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
CHKB-CPT1BH3BT56 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
CHKB-CPT1BH3BT56 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
CHKB-CPT1BH3BT56 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
CHKB-CPT1BH3BT56 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
CHKB-CPT1BH3BT56 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
CHKB-CPT1BH3BT56 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
CHKB-CPT1BH3BT56 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC9.34□□□□□ -0.91
CHKB-CPT1BH3BT56 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
CHKB-CPT1BH3BT56 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
CHKB-CPT1BH3BT56 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
CHKB-CPT1BH3BT56 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC9.34□□□□□ -0.92
CHKB-CPT1BH3BT56 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 MTUS2-206ENST00000612955 7430 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
CHKB-CPT1BH3BT56 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC9.33□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms