Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.9□□□□□ -0.02
NPIPB4C9JG80 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPB4C9JG80 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPB4C9JG80 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPB4C9JG80 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPB4C9JG80 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.9□□□□□ -0.02
NPIPB4C9JG80 UBALD1-205ENST00000590891 2641 ntBASIC14.9□□□□□ -0.02
NPIPB4C9JG80 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPB4C9JG80 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPB4C9JG80 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.9□□□□□ -0.02
NPIPB4C9JG80 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPB4C9JG80 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPB4C9JG80 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
NPIPB4C9JG80 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPB4C9JG80 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPB4C9JG80 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPB4C9JG80 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.9□□□□□ -0.02
NPIPB4C9JG80 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.9□□□□□ -0.02
NPIPB4C9JG80 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
NPIPB4C9JG80 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.9□□□□□ -0.02
NPIPB4C9JG80 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC14.9□□□□□ -0.02
NPIPB4C9JG80 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPB4C9JG80 AC093909.1-201ENST00000504731 1122 ntBASIC14.9□□□□□ -0.02
NPIPB4C9JG80 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.9□□□□□ -0.02
NPIPB4C9JG80 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.9□□□□□ -0.02
NPIPB4C9JG80 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.9□□□□□ -0.02
NPIPB4C9JG80 ACTL9-202ENST00000612068 1252 ntBASIC14.9□□□□□ -0.02
NPIPB4C9JG80 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.9□□□□□ -0.02
NPIPB4C9JG80 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.9□□□□□ -0.02
NPIPB4C9JG80 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.9□□□□□ -0.02
NPIPB4C9JG80 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
NPIPB4C9JG80 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPB4C9JG80 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPB4C9JG80 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPB4C9JG80 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPB4C9JG80 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPB4C9JG80 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPB4C9JG80 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPB4C9JG80 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC14.9□□□□□ -0.02
NPIPB4C9JG80 GPAA1P2-202ENST00000606848 1787 ntBASIC14.9□□□□□ -0.02
NPIPB4C9JG80 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPB4C9JG80 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPB4C9JG80 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPB4C9JG80 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.9□□□□□ -0.02
NPIPB4C9JG80 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPB4C9JG80 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
NPIPB4C9JG80 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPB4C9JG80 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.9□□□□□ -0.02
NPIPB4C9JG80 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
NPIPB4C9JG80 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPB4C9JG80 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPB4C9JG80 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPB4C9JG80 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPB4C9JG80 AL671710.1-201ENST00000610245 2349 ntBASIC14.89□□□□□ -0.03
NPIPB4C9JG80 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.89□□□□□ -0.03
NPIPB4C9JG80 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
NPIPB4C9JG80 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
NPIPB4C9JG80 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPB4C9JG80 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPB4C9JG80 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
NPIPB4C9JG80 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
NPIPB4C9JG80 AC012569.1-201ENST00000591191 1524 ntBASIC14.89□□□□□ -0.03
NPIPB4C9JG80 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPB4C9JG80 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPB4C9JG80 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPB4C9JG80 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPB4C9JG80 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
NPIPB4C9JG80 POU5F1P6-201ENST00000466990 990 ntBASIC14.89□□□□□ -0.03
NPIPB4C9JG80 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC14.89□□□□□ -0.03
NPIPB4C9JG80 AC108751.1-201ENST00000490852 363 ntBASIC14.89□□□□□ -0.03
NPIPB4C9JG80 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.89□□□□□ -0.03
NPIPB4C9JG80 RNA5SP419-201ENST00000515908 135 ntBASIC14.89□□□□□ -0.03
NPIPB4C9JG80 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
NPIPB4C9JG80 MIR4515-201ENST00000584082 81 ntBASIC14.89□□□□□ -0.03
NPIPB4C9JG80 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
NPIPB4C9JG80 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
NPIPB4C9JG80 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.89□□□□□ -0.03
NPIPB4C9JG80 AC020765.3-201ENST00000613051 740 ntBASIC14.89□□□□□ -0.03
NPIPB4C9JG80 AC004790.2-201ENST00000623588 572 ntBASIC14.89□□□□□ -0.03
NPIPB4C9JG80 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.89□□□□□ -0.03
NPIPB4C9JG80 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
NPIPB4C9JG80 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC14.89□□□□□ -0.03
NPIPB4C9JG80 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.89□□□□□ -0.03
NPIPB4C9JG80 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.89□□□□□ -0.03
NPIPB4C9JG80 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
NPIPB4C9JG80 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPB4C9JG80 LINC01144-201ENST00000626198 1710 ntBASIC14.89□□□□□ -0.03
NPIPB4C9JG80 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPB4C9JG80 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPB4C9JG80 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPB4C9JG80 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC14.89□□□□□ -0.03
NPIPB4C9JG80 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPB4C9JG80 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPB4C9JG80 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC14.88□□□□□ -0.03
NPIPB4C9JG80 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.88□□□□□ -0.03
NPIPB4C9JG80 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
NPIPB4C9JG80 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
NPIPB4C9JG80 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPB4C9JG80 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPB4C9JG80 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms