Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 AC114501.2-201ENST00000439631 535 ntBASIC22.58■■□□□ 1.21
SBNO1A3KN83 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC22.58■■□□□ 1.21
SBNO1A3KN83 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
SBNO1A3KN83 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC22.58■■□□□ 1.21
SBNO1A3KN83 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC22.58■■□□□ 1.21
SBNO1A3KN83 SIGLEC29P-201ENST00000599873 1114 ntBASIC22.58■■□□□ 1.21
SBNO1A3KN83 AL606495.2-201ENST00000605867 535 ntBASIC22.58■■□□□ 1.21
SBNO1A3KN83 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC22.58■■□□□ 1.21
SBNO1A3KN83 AC007431.3-201ENST00000623221 587 ntBASIC22.58■■□□□ 1.21
SBNO1A3KN83 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
SBNO1A3KN83 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
SBNO1A3KN83 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC22.58■■□□□ 1.2
SBNO1A3KN83 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
SBNO1A3KN83 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC22.58■■□□□ 1.2
SBNO1A3KN83 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SBNO1A3KN83 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SBNO1A3KN83 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
SBNO1A3KN83 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
SBNO1A3KN83 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
SBNO1A3KN83 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC22.57■■□□□ 1.2
SBNO1A3KN83 MIR658-201ENST00000385210 100 ntBASIC22.57■■□□□ 1.2
SBNO1A3KN83 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SBNO1A3KN83 AC022210.1-201ENST00000449856 793 ntBASIC22.57■■□□□ 1.2
SBNO1A3KN83 GLI4-203ENST00000517468 963 ntTSL 5 BASIC22.57■■□□□ 1.2
SBNO1A3KN83 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
SBNO1A3KN83 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC22.57■■□□□ 1.2
SBNO1A3KN83 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC22.57■■□□□ 1.2
SBNO1A3KN83 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC22.57■■□□□ 1.2
SBNO1A3KN83 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC22.57■■□□□ 1.2
SBNO1A3KN83 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SBNO1A3KN83 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
SBNO1A3KN83 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC22.57■■□□□ 1.2
SBNO1A3KN83 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SBNO1A3KN83 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC22.56■■□□□ 1.2
SBNO1A3KN83 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC22.56■■□□□ 1.2
SBNO1A3KN83 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC22.56■■□□□ 1.2
SBNO1A3KN83 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC22.56■■□□□ 1.2
SBNO1A3KN83 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC22.56■■□□□ 1.2
SBNO1A3KN83 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
SBNO1A3KN83 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
SBNO1A3KN83 AC055876.2-201ENST00000531834 546 ntBASIC22.56■■□□□ 1.2
SBNO1A3KN83 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC22.56■■□□□ 1.2
SBNO1A3KN83 RAB43P1-201ENST00000561790 589 ntBASIC22.56■■□□□ 1.2
SBNO1A3KN83 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SBNO1A3KN83 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
SBNO1A3KN83 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SBNO1A3KN83 CD276-203ENST00000537340 2439 ntTSL 2 BASIC22.56■■□□□ 1.2
SBNO1A3KN83 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC22.56■■□□□ 1.2
SBNO1A3KN83 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SBNO1A3KN83 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
SBNO1A3KN83 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SBNO1A3KN83 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC22.56■■□□□ 1.2
SBNO1A3KN83 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SBNO1A3KN83 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SBNO1A3KN83 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
SBNO1A3KN83 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC22.55■■□□□ 1.2
SBNO1A3KN83 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC22.55■■□□□ 1.2
SBNO1A3KN83 RPS19-201ENST00000221975 500 ntTSL 3 BASIC22.55■■□□□ 1.2
SBNO1A3KN83 RBM39-205ENST00000397370 612 ntTSL 2 BASIC22.55■■□□□ 1.2
SBNO1A3KN83 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC22.55■■□□□ 1.2
SBNO1A3KN83 RN7SL837P-201ENST00000463010 287 ntBASIC22.55■■□□□ 1.2
SBNO1A3KN83 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC22.55■■□□□ 1.2
SBNO1A3KN83 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
SBNO1A3KN83 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
SBNO1A3KN83 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SBNO1A3KN83 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
SBNO1A3KN83 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SBNO1A3KN83 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC22.54■■□□□ 1.2
SBNO1A3KN83 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC22.54■■□□□ 1.2
SBNO1A3KN83 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC22.54■■□□□ 1.2
SBNO1A3KN83 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC22.54■■□□□ 1.2
SBNO1A3KN83 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SBNO1A3KN83 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SBNO1A3KN83 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC22.54■■□□□ 1.2
SBNO1A3KN83 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC22.54■■□□□ 1.2
SBNO1A3KN83 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SBNO1A3KN83 CD81-207ENST00000481687 890 ntTSL 2 BASIC22.54■■□□□ 1.2
SBNO1A3KN83 AC119751.2-201ENST00000504529 210 ntBASIC22.54■■□□□ 1.2
SBNO1A3KN83 RNA5SP410-201ENST00000516285 106 ntBASIC22.54■■□□□ 1.2
SBNO1A3KN83 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC22.54■■□□□ 1.2
SBNO1A3KN83 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC22.54■■□□□ 1.2
SBNO1A3KN83 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC22.54■■□□□ 1.2
SBNO1A3KN83 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SBNO1A3KN83 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
SBNO1A3KN83 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC22.54■■□□□ 1.2
SBNO1A3KN83 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SBNO1A3KN83 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SBNO1A3KN83 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SBNO1A3KN83 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC22.54■■□□□ 1.2
SBNO1A3KN83 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SBNO1A3KN83 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
SBNO1A3KN83 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC22.54■■□□□ 1.2
SBNO1A3KN83 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC22.54■■□□□ 1.2
SBNO1A3KN83 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC22.54■■□□□ 1.2
SBNO1A3KN83 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
SBNO1A3KN83 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
SBNO1A3KN83 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SBNO1A3KN83 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
SBNO1A3KN83 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
SBNO1A3KN83 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms