Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00959A0A1B0GUT2 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00959A0A1B0GUT2 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00959A0A1B0GUT2 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
LINC00959A0A1B0GUT2 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00959A0A1B0GUT2 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC11.54□□□□□ -0.56
LINC00959A0A1B0GUT2 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00959A0A1B0GUT2 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00959A0A1B0GUT2 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00959A0A1B0GUT2 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00959A0A1B0GUT2 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00959A0A1B0GUT2 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00959A0A1B0GUT2 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC11.54□□□□□ -0.56
LINC00959A0A1B0GUT2 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00959A0A1B0GUT2 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00959A0A1B0GUT2 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00959A0A1B0GUT2 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
LINC00959A0A1B0GUT2 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00959A0A1B0GUT2 AL513523.2-202ENST00000427283 2040 ntBASIC11.53□□□□□ -0.56
LINC00959A0A1B0GUT2 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC11.53□□□□□ -0.56
LINC00959A0A1B0GUT2 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00959A0A1B0GUT2 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00959A0A1B0GUT2 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00959A0A1B0GUT2 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC11.53□□□□□ -0.56
LINC00959A0A1B0GUT2 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00959A0A1B0GUT2 BANP-204ENST00000393208 2283 ntTSL 2 BASIC11.53□□□□□ -0.56
LINC00959A0A1B0GUT2 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00959A0A1B0GUT2 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00959A0A1B0GUT2 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00959A0A1B0GUT2 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00959A0A1B0GUT2 HNRNPRP1-201ENST00000453465 1695 ntBASIC11.53□□□□□ -0.56
LINC00959A0A1B0GUT2 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00959A0A1B0GUT2 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC11.53□□□□□ -0.56
LINC00959A0A1B0GUT2 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC11.53□□□□□ -0.56
LINC00959A0A1B0GUT2 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC11.53□□□□□ -0.56
LINC00959A0A1B0GUT2 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00959A0A1B0GUT2 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00959A0A1B0GUT2 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00959A0A1B0GUT2 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00959A0A1B0GUT2 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00959A0A1B0GUT2 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00959A0A1B0GUT2 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
LINC00959A0A1B0GUT2 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC11.53□□□□□ -0.56
LINC00959A0A1B0GUT2 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00959A0A1B0GUT2 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC11.53□□□□□ -0.56
LINC00959A0A1B0GUT2 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00959A0A1B0GUT2 AP002414.1-201ENST00000391405 1147 ntBASIC11.53□□□□□ -0.56
LINC00959A0A1B0GUT2 NABP1-203ENST00000409510 843 ntTSL 5 BASIC11.53□□□□□ -0.56
LINC00959A0A1B0GUT2 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC11.53□□□□□ -0.56
LINC00959A0A1B0GUT2 ABCD1P5-201ENST00000445663 754 ntBASIC11.53□□□□□ -0.56
LINC00959A0A1B0GUT2 HLA-J-202ENST00000469281 1241 ntBASIC11.53□□□□□ -0.56
LINC00959A0A1B0GUT2 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC11.53□□□□□ -0.56
LINC00959A0A1B0GUT2 KRT18P21-201ENST00000515767 1272 ntBASIC11.53□□□□□ -0.56
LINC00959A0A1B0GUT2 DUX4L17-201ENST00000557360 1267 ntBASIC11.53□□□□□ -0.56
LINC00959A0A1B0GUT2 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC11.53□□□□□ -0.56
LINC00959A0A1B0GUT2 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC11.53□□□□□ -0.56
LINC00959A0A1B0GUT2 GZMM-202ENST00000592501 941 ntTSL 3 BASIC11.53□□□□□ -0.56
LINC00959A0A1B0GUT2 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00959A0A1B0GUT2 AC092329.2-201ENST00000598402 547 ntBASIC11.53□□□□□ -0.56
LINC00959A0A1B0GUT2 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00959A0A1B0GUT2 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00959A0A1B0GUT2 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00959A0A1B0GUT2 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC11.53□□□□□ -0.56
LINC00959A0A1B0GUT2 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00959A0A1B0GUT2 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC11.53□□□□□ -0.56
LINC00959A0A1B0GUT2 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00959A0A1B0GUT2 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC11.53□□□□□ -0.56
LINC00959A0A1B0GUT2 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC11.53□□□□□ -0.56
LINC00959A0A1B0GUT2 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00959A0A1B0GUT2 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00959A0A1B0GUT2 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
LINC00959A0A1B0GUT2 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00959A0A1B0GUT2 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00959A0A1B0GUT2 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00959A0A1B0GUT2 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00959A0A1B0GUT2 IER3-202ENST00000376377 1350 ntBASIC11.53□□□□□ -0.56
LINC00959A0A1B0GUT2 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00959A0A1B0GUT2 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00959A0A1B0GUT2 AC004817.3-201ENST00000602957 2129 ntBASIC11.53□□□□□ -0.56
LINC00959A0A1B0GUT2 AC008741.2-201ENST00000612792 3115 ntBASIC11.53□□□□□ -0.56
LINC00959A0A1B0GUT2 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
LINC00959A0A1B0GUT2 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC11.52□□□□□ -0.56
LINC00959A0A1B0GUT2 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC11.52□□□□□ -0.56
LINC00959A0A1B0GUT2 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
LINC00959A0A1B0GUT2 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
LINC00959A0A1B0GUT2 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
LINC00959A0A1B0GUT2 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
LINC00959A0A1B0GUT2 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.56
LINC00959A0A1B0GUT2 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC11.52□□□□□ -0.56
LINC00959A0A1B0GUT2 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
LINC00959A0A1B0GUT2 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
LINC00959A0A1B0GUT2 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
LINC00959A0A1B0GUT2 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
LINC00959A0A1B0GUT2 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
LINC00959A0A1B0GUT2 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
LINC00959A0A1B0GUT2 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00959A0A1B0GUT2 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00959A0A1B0GUT2 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC11.52□□□□□ -0.57
LINC00959A0A1B0GUT2 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00959A0A1B0GUT2 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms