Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
HCFC2Q9Y5Z7 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.5■□□□□ 0.39
HCFC2Q9Y5Z7 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.5■□□□□ 0.39
HCFC2Q9Y5Z7 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HCFC2Q9Y5Z7 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HCFC2Q9Y5Z7 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
HCFC2Q9Y5Z7 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
HCFC2Q9Y5Z7 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.5■□□□□ 0.39
HCFC2Q9Y5Z7 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.5■□□□□ 0.39
HCFC2Q9Y5Z7 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC17.5■□□□□ 0.39
HCFC2Q9Y5Z7 MTND6P24-201ENST00000440466 518 ntBASIC17.5■□□□□ 0.39
HCFC2Q9Y5Z7 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC17.5■□□□□ 0.39
HCFC2Q9Y5Z7 ATP5G2P4-201ENST00000442175 420 ntBASIC17.5■□□□□ 0.39
HCFC2Q9Y5Z7 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HCFC2Q9Y5Z7 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC17.5■□□□□ 0.39
HCFC2Q9Y5Z7 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.5■□□□□ 0.39
HCFC2Q9Y5Z7 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.5■□□□□ 0.39
HCFC2Q9Y5Z7 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.5■□□□□ 0.39
HCFC2Q9Y5Z7 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HCFC2Q9Y5Z7 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC17.5■□□□□ 0.39
HCFC2Q9Y5Z7 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.5■□□□□ 0.39
HCFC2Q9Y5Z7 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.5■□□□□ 0.39
HCFC2Q9Y5Z7 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HCFC2Q9Y5Z7 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HCFC2Q9Y5Z7 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.5■□□□□ 0.39
HCFC2Q9Y5Z7 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HCFC2Q9Y5Z7 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HCFC2Q9Y5Z7 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.5■□□□□ 0.39
HCFC2Q9Y5Z7 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
HCFC2Q9Y5Z7 BCL2-203ENST00000589955 5011 ntBASIC17.5■□□□□ 0.39
HCFC2Q9Y5Z7 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HCFC2Q9Y5Z7 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HCFC2Q9Y5Z7 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HCFC2Q9Y5Z7 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.5■□□□□ 0.39
HCFC2Q9Y5Z7 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
HCFC2Q9Y5Z7 AC007541.1-201ENST00000570282 1469 ntBASIC17.5■□□□□ 0.39
HCFC2Q9Y5Z7 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HCFC2Q9Y5Z7 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
HCFC2Q9Y5Z7 AC008764.6-201ENST00000595909 2069 ntBASIC17.49■□□□□ 0.39
HCFC2Q9Y5Z7 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HCFC2Q9Y5Z7 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HCFC2Q9Y5Z7 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HCFC2Q9Y5Z7 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
HCFC2Q9Y5Z7 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HCFC2Q9Y5Z7 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HCFC2Q9Y5Z7 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
HCFC2Q9Y5Z7 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HCFC2Q9Y5Z7 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC17.49■□□□□ 0.39
HCFC2Q9Y5Z7 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC17.49■□□□□ 0.39
HCFC2Q9Y5Z7 FAM220BP-201ENST00000377689 816 ntBASIC17.49■□□□□ 0.39
HCFC2Q9Y5Z7 RPL37AP1-201ENST00000412502 279 ntBASIC17.49■□□□□ 0.39
HCFC2Q9Y5Z7 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC17.49■□□□□ 0.39
HCFC2Q9Y5Z7 HLA-V-201ENST00000429037 534 ntBASIC17.49■□□□□ 0.39
HCFC2Q9Y5Z7 PTPA-220ENST00000436883 532 ntTSL 4 BASIC17.49■□□□□ 0.39
HCFC2Q9Y5Z7 U91328.1-201ENST00000437528 223 ntBASIC17.49■□□□□ 0.39
HCFC2Q9Y5Z7 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC17.49■□□□□ 0.39
HCFC2Q9Y5Z7 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.49■□□□□ 0.39
HCFC2Q9Y5Z7 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.49■□□□□ 0.39
HCFC2Q9Y5Z7 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.49■□□□□ 0.39
HCFC2Q9Y5Z7 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC17.49■□□□□ 0.39
HCFC2Q9Y5Z7 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HCFC2Q9Y5Z7 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC17.49■□□□□ 0.39
HCFC2Q9Y5Z7 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.49■□□□□ 0.39
HCFC2Q9Y5Z7 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.49■□□□□ 0.39
HCFC2Q9Y5Z7 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.49■□□□□ 0.39
HCFC2Q9Y5Z7 AL589739.1-201ENST00000607720 493 ntBASIC17.49■□□□□ 0.39
HCFC2Q9Y5Z7 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
HCFC2Q9Y5Z7 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
HCFC2Q9Y5Z7 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC17.49■□□□□ 0.39
HCFC2Q9Y5Z7 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.49■□□□□ 0.39
HCFC2Q9Y5Z7 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HCFC2Q9Y5Z7 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
HCFC2Q9Y5Z7 AL390961.4-201ENST00000623958 2535 ntBASIC17.49■□□□□ 0.39
HCFC2Q9Y5Z7 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
HCFC2Q9Y5Z7 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.48■□□□□ 0.39
HCFC2Q9Y5Z7 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.48■□□□□ 0.39
HCFC2Q9Y5Z7 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
HCFC2Q9Y5Z7 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HCFC2Q9Y5Z7 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HCFC2Q9Y5Z7 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HCFC2Q9Y5Z7 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HCFC2Q9Y5Z7 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.48■□□□□ 0.39
HCFC2Q9Y5Z7 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.48■□□□□ 0.39
HCFC2Q9Y5Z7 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HCFC2Q9Y5Z7 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HCFC2Q9Y5Z7 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HCFC2Q9Y5Z7 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HCFC2Q9Y5Z7 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.48■□□□□ 0.39
HCFC2Q9Y5Z7 ARSEP1-201ENST00000420443 635 ntBASIC17.48■□□□□ 0.39
HCFC2Q9Y5Z7 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
HCFC2Q9Y5Z7 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HCFC2Q9Y5Z7 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.48■□□□□ 0.39
HCFC2Q9Y5Z7 API5-211ENST00000534695 560 ntTSL 5 BASIC17.48■□□□□ 0.39
HCFC2Q9Y5Z7 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC17.48■□□□□ 0.39
HCFC2Q9Y5Z7 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.48■□□□□ 0.39
HCFC2Q9Y5Z7 RN7SL828P-201ENST00000607615 303 ntBASIC17.48■□□□□ 0.39
HCFC2Q9Y5Z7 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HCFC2Q9Y5Z7 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HCFC2Q9Y5Z7 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HCFC2Q9Y5Z7 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms