Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
CDC42BPBQ9Y5S2 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
CDC42BPBQ9Y5S2 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CDC42BPBQ9Y5S2 DOC2GP-202ENST00000514950 1163 ntBASIC25.09■■□□□ 1.61
CDC42BPBQ9Y5S2 GLI4-203ENST00000517468 963 ntTSL 5 BASIC25.09■■□□□ 1.61
CDC42BPBQ9Y5S2 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC25.09■■□□□ 1.61
CDC42BPBQ9Y5S2 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC25.09■■□□□ 1.61
CDC42BPBQ9Y5S2 MIR6805-201ENST00000615055 62 ntBASIC25.09■■□□□ 1.61
CDC42BPBQ9Y5S2 AL109936.8-201ENST00000641772 604 ntBASIC25.09■■□□□ 1.61
CDC42BPBQ9Y5S2 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CDC42BPBQ9Y5S2 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
CDC42BPBQ9Y5S2 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CDC42BPBQ9Y5S2 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CDC42BPBQ9Y5S2 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC25.08■■□□□ 1.61
CDC42BPBQ9Y5S2 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC25.08■■□□□ 1.61
CDC42BPBQ9Y5S2 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
CDC42BPBQ9Y5S2 AC092053.1-201ENST00000605787 1936 ntBASIC25.08■■□□□ 1.61
CDC42BPBQ9Y5S2 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
CDC42BPBQ9Y5S2 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
CDC42BPBQ9Y5S2 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC25.08■■□□□ 1.61
CDC42BPBQ9Y5S2 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CDC42BPBQ9Y5S2 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
CDC42BPBQ9Y5S2 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
CDC42BPBQ9Y5S2 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CDC42BPBQ9Y5S2 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CDC42BPBQ9Y5S2 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
CDC42BPBQ9Y5S2 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CDC42BPBQ9Y5S2 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
CDC42BPBQ9Y5S2 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC25.08■■□□□ 1.61
CDC42BPBQ9Y5S2 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC25.08■■□□□ 1.61
CDC42BPBQ9Y5S2 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
CDC42BPBQ9Y5S2 CD81-207ENST00000481687 890 ntTSL 2 BASIC25.08■■□□□ 1.61
CDC42BPBQ9Y5S2 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
CDC42BPBQ9Y5S2 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC25.08■■□□□ 1.61
CDC42BPBQ9Y5S2 AC008735.3-201ENST00000596646 500 ntBASIC25.08■■□□□ 1.61
CDC42BPBQ9Y5S2 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC25.08■■□□□ 1.61
CDC42BPBQ9Y5S2 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CDC42BPBQ9Y5S2 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
CDC42BPBQ9Y5S2 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC25.08■■□□□ 1.6
CDC42BPBQ9Y5S2 CROCCP2-202ENST00000412962 2773 ntBASIC25.08■■□□□ 1.6
CDC42BPBQ9Y5S2 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
CDC42BPBQ9Y5S2 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
CDC42BPBQ9Y5S2 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC25.07■■□□□ 1.6
CDC42BPBQ9Y5S2 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CDC42BPBQ9Y5S2 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC25.07■■□□□ 1.6
CDC42BPBQ9Y5S2 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC25.07■■□□□ 1.6
CDC42BPBQ9Y5S2 ELK1P1-201ENST00000485699 580 ntBASIC25.07■■□□□ 1.6
CDC42BPBQ9Y5S2 AC092337.1-201ENST00000568699 1129 ntBASIC25.07■■□□□ 1.6
CDC42BPBQ9Y5S2 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC25.07■■□□□ 1.6
CDC42BPBQ9Y5S2 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC25.07■■□□□ 1.6
CDC42BPBQ9Y5S2 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC25.07■■□□□ 1.6
CDC42BPBQ9Y5S2 RPSAP52-203ENST00000622976 1023 ntBASIC25.07■■□□□ 1.6
CDC42BPBQ9Y5S2 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CDC42BPBQ9Y5S2 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC25.07■■□□□ 1.6
CDC42BPBQ9Y5S2 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC25.07■■□□□ 1.6
CDC42BPBQ9Y5S2 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC25.07■■□□□ 1.6
CDC42BPBQ9Y5S2 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CDC42BPBQ9Y5S2 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC25.07■■□□□ 1.6
CDC42BPBQ9Y5S2 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CDC42BPBQ9Y5S2 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC25.07■■□□□ 1.6
CDC42BPBQ9Y5S2 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC25.07■■□□□ 1.6
CDC42BPBQ9Y5S2 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC25.07■■□□□ 1.6
CDC42BPBQ9Y5S2 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC25.07■■□□□ 1.6
CDC42BPBQ9Y5S2 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
CDC42BPBQ9Y5S2 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CDC42BPBQ9Y5S2 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
CDC42BPBQ9Y5S2 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
CDC42BPBQ9Y5S2 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
CDC42BPBQ9Y5S2 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC25.06■■□□□ 1.6
CDC42BPBQ9Y5S2 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CDC42BPBQ9Y5S2 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC25.06■■□□□ 1.6
CDC42BPBQ9Y5S2 AC024267.1-201ENST00000582320 895 ntBASIC25.06■■□□□ 1.6
CDC42BPBQ9Y5S2 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
CDC42BPBQ9Y5S2 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CDC42BPBQ9Y5S2 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CDC42BPBQ9Y5S2 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
CDC42BPBQ9Y5S2 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC25.06■■□□□ 1.6
CDC42BPBQ9Y5S2 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC25.06■■□□□ 1.6
CDC42BPBQ9Y5S2 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC25.06■■□□□ 1.6
CDC42BPBQ9Y5S2 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CDC42BPBQ9Y5S2 TPRX2P-201ENST00000535362 881 ntBASIC25.06■■□□□ 1.6
CDC42BPBQ9Y5S2 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CDC42BPBQ9Y5S2 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CDC42BPBQ9Y5S2 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
CDC42BPBQ9Y5S2 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC25.06■■□□□ 1.6
CDC42BPBQ9Y5S2 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
CDC42BPBQ9Y5S2 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC25.05■■□□□ 1.6
CDC42BPBQ9Y5S2 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
CDC42BPBQ9Y5S2 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CDC42BPBQ9Y5S2 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
CDC42BPBQ9Y5S2 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CDC42BPBQ9Y5S2 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC25.05■■□□□ 1.6
CDC42BPBQ9Y5S2 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CDC42BPBQ9Y5S2 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC25.05■■□□□ 1.6
CDC42BPBQ9Y5S2 OSM-203ENST00000403463 464 ntTSL 3 BASIC25.05■■□□□ 1.6
CDC42BPBQ9Y5S2 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC25.05■■□□□ 1.6
CDC42BPBQ9Y5S2 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
CDC42BPBQ9Y5S2 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC25.05■■□□□ 1.6
CDC42BPBQ9Y5S2 USP32P1-208ENST00000506594 1164 ntBASIC25.05■■□□□ 1.6
CDC42BPBQ9Y5S2 CTBP2P3-201ENST00000585629 1255 ntBASIC25.05■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms