Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.08■□□□□ 0.32
RAI2Q9Y5P3 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.08■□□□□ 0.32
RAI2Q9Y5P3 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.08■□□□□ 0.32
RAI2Q9Y5P3 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAI2Q9Y5P3 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.08■□□□□ 0.32
RAI2Q9Y5P3 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.08■□□□□ 0.32
RAI2Q9Y5P3 ACTL9-202ENST00000612068 1252 ntBASIC17.08■□□□□ 0.32
RAI2Q9Y5P3 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAI2Q9Y5P3 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAI2Q9Y5P3 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAI2Q9Y5P3 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAI2Q9Y5P3 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAI2Q9Y5P3 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RAI2Q9Y5P3 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
RAI2Q9Y5P3 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RAI2Q9Y5P3 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RAI2Q9Y5P3 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAI2Q9Y5P3 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.07■□□□□ 0.32
RAI2Q9Y5P3 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAI2Q9Y5P3 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.07■□□□□ 0.32
RAI2Q9Y5P3 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
RAI2Q9Y5P3 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RAI2Q9Y5P3 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RAI2Q9Y5P3 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.07■□□□□ 0.32
RAI2Q9Y5P3 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RAI2Q9Y5P3 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAI2Q9Y5P3 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.07■□□□□ 0.32
RAI2Q9Y5P3 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RAI2Q9Y5P3 AL035633.1-201ENST00000406139 838 ntBASIC17.07■□□□□ 0.32
RAI2Q9Y5P3 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.07■□□□□ 0.32
RAI2Q9Y5P3 AC023274.1-201ENST00000418278 595 ntBASIC17.07■□□□□ 0.32
RAI2Q9Y5P3 FAM8A3P-201ENST00000427218 844 ntBASIC17.07■□□□□ 0.32
RAI2Q9Y5P3 KRT18P2-201ENST00000447938 1258 ntBASIC17.07■□□□□ 0.32
RAI2Q9Y5P3 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.07■□□□□ 0.32
RAI2Q9Y5P3 CYMP-203ENST00000474680 1263 ntBASIC17.07■□□□□ 0.32
RAI2Q9Y5P3 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.07■□□□□ 0.32
RAI2Q9Y5P3 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.07■□□□□ 0.32
RAI2Q9Y5P3 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.07■□□□□ 0.32
RAI2Q9Y5P3 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
RAI2Q9Y5P3 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.07■□□□□ 0.32
RAI2Q9Y5P3 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAI2Q9Y5P3 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
RAI2Q9Y5P3 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
RAI2Q9Y5P3 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAI2Q9Y5P3 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAI2Q9Y5P3 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
RAI2Q9Y5P3 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
RAI2Q9Y5P3 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAI2Q9Y5P3 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.07■□□□□ 0.32
RAI2Q9Y5P3 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAI2Q9Y5P3 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAI2Q9Y5P3 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.07■□□□□ 0.32
RAI2Q9Y5P3 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAI2Q9Y5P3 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.07■□□□□ 0.32
RAI2Q9Y5P3 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAI2Q9Y5P3 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAI2Q9Y5P3 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAI2Q9Y5P3 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAI2Q9Y5P3 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
RAI2Q9Y5P3 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAI2Q9Y5P3 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAI2Q9Y5P3 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAI2Q9Y5P3 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAI2Q9Y5P3 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAI2Q9Y5P3 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAI2Q9Y5P3 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAI2Q9Y5P3 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
RAI2Q9Y5P3 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAI2Q9Y5P3 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAI2Q9Y5P3 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.06■□□□□ 0.32
RAI2Q9Y5P3 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAI2Q9Y5P3 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAI2Q9Y5P3 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAI2Q9Y5P3 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.06■□□□□ 0.32
RAI2Q9Y5P3 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
RAI2Q9Y5P3 AC211486.1-202ENST00000416371 468 ntBASIC17.06■□□□□ 0.32
RAI2Q9Y5P3 AC004832.2-201ENST00000426397 482 ntBASIC17.06■□□□□ 0.32
RAI2Q9Y5P3 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.06■□□□□ 0.32
RAI2Q9Y5P3 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
RAI2Q9Y5P3 AC211476.1-201ENST00000503899 468 ntBASIC17.06■□□□□ 0.32
RAI2Q9Y5P3 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAI2Q9Y5P3 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.06■□□□□ 0.32
RAI2Q9Y5P3 AC096734.2-201ENST00000562054 433 ntBASIC17.06■□□□□ 0.32
RAI2Q9Y5P3 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
RAI2Q9Y5P3 AC005412.3-201ENST00000580309 715 ntBASIC17.06■□□□□ 0.32
RAI2Q9Y5P3 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.06■□□□□ 0.32
RAI2Q9Y5P3 MPDU1-223ENST00000582151 728 ntBASIC17.06■□□□□ 0.32
RAI2Q9Y5P3 AC010507.1-201ENST00000633895 436 ntBASIC17.06■□□□□ 0.32
RAI2Q9Y5P3 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.06■□□□□ 0.32
RAI2Q9Y5P3 AD000864.1-201ENST00000624076 2295 ntBASIC17.06■□□□□ 0.32
RAI2Q9Y5P3 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAI2Q9Y5P3 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
RAI2Q9Y5P3 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
RAI2Q9Y5P3 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
RAI2Q9Y5P3 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAI2Q9Y5P3 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAI2Q9Y5P3 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAI2Q9Y5P3 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAI2Q9Y5P3 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAI2Q9Y5P3 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms