Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA11Q9Y5H2 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDHGA11Q9Y5H2 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA11Q9Y5H2 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA11Q9Y5H2 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDHGA11Q9Y5H2 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA11Q9Y5H2 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA11Q9Y5H2 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA11Q9Y5H2 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA11Q9Y5H2 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA11Q9Y5H2 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDHGA11Q9Y5H2 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA11Q9Y5H2 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA11Q9Y5H2 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDHGA11Q9Y5H2 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PCDHGA11Q9Y5H2 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA11Q9Y5H2 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA11Q9Y5H2 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA11Q9Y5H2 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA11Q9Y5H2 AC008741.2-201ENST00000612792 3115 ntBASIC16.41■□□□□ 0.22
PCDHGA11Q9Y5H2 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA11Q9Y5H2 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA11Q9Y5H2 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA11Q9Y5H2 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
PCDHGA11Q9Y5H2 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA11Q9Y5H2 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDHGA11Q9Y5H2 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
PCDHGA11Q9Y5H2 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA11Q9Y5H2 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA11Q9Y5H2 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA11Q9Y5H2 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.41■□□□□ 0.22
PCDHGA11Q9Y5H2 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.41■□□□□ 0.22
PCDHGA11Q9Y5H2 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.41■□□□□ 0.22
PCDHGA11Q9Y5H2 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.41■□□□□ 0.22
PCDHGA11Q9Y5H2 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.41■□□□□ 0.22
PCDHGA11Q9Y5H2 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDHGA11Q9Y5H2 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA11Q9Y5H2 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDHGA11Q9Y5H2 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PCDHGA11Q9Y5H2 TERC-201ENST00000602385 541 ntBASIC16.41■□□□□ 0.22
PCDHGA11Q9Y5H2 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
PCDHGA11Q9Y5H2 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.41■□□□□ 0.22
PCDHGA11Q9Y5H2 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA11Q9Y5H2 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA11Q9Y5H2 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.41■□□□□ 0.22
PCDHGA11Q9Y5H2 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDHGA11Q9Y5H2 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA11Q9Y5H2 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.41■□□□□ 0.22
PCDHGA11Q9Y5H2 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA11Q9Y5H2 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.41■□□□□ 0.22
PCDHGA11Q9Y5H2 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDHGA11Q9Y5H2 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA11Q9Y5H2 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDHGA11Q9Y5H2 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA11Q9Y5H2 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PCDHGA11Q9Y5H2 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA11Q9Y5H2 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA11Q9Y5H2 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA11Q9Y5H2 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.4■□□□□ 0.22
PCDHGA11Q9Y5H2 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA11Q9Y5H2 AC243591.1-201ENST00000452967 1364 ntBASIC16.4■□□□□ 0.22
PCDHGA11Q9Y5H2 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PCDHGA11Q9Y5H2 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA11Q9Y5H2 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDHGA11Q9Y5H2 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PCDHGA11Q9Y5H2 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA11Q9Y5H2 PCDHB17P-201ENST00000539533 2393 ntBASIC16.4■□□□□ 0.22
PCDHGA11Q9Y5H2 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA11Q9Y5H2 AKR1C7P-201ENST00000305623 895 ntBASIC16.4■□□□□ 0.22
PCDHGA11Q9Y5H2 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA11Q9Y5H2 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA11Q9Y5H2 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.4■□□□□ 0.22
PCDHGA11Q9Y5H2 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
PCDHGA11Q9Y5H2 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.4■□□□□ 0.22
PCDHGA11Q9Y5H2 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA11Q9Y5H2 AF238378.1-201ENST00000526806 358 ntBASIC16.4■□□□□ 0.22
PCDHGA11Q9Y5H2 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDHGA11Q9Y5H2 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.4■□□□□ 0.22
PCDHGA11Q9Y5H2 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PCDHGA11Q9Y5H2 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.4■□□□□ 0.22
PCDHGA11Q9Y5H2 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
PCDHGA11Q9Y5H2 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDHGA11Q9Y5H2 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDHGA11Q9Y5H2 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA11Q9Y5H2 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA11Q9Y5H2 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA11Q9Y5H2 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA11Q9Y5H2 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA11Q9Y5H2 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA11Q9Y5H2 AC026691.1-201ENST00000602502 2017 ntBASIC16.4■□□□□ 0.22
PCDHGA11Q9Y5H2 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGA11Q9Y5H2 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.39■□□□□ 0.22
PCDHGA11Q9Y5H2 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.39■□□□□ 0.22
PCDHGA11Q9Y5H2 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
PCDHGA11Q9Y5H2 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGA11Q9Y5H2 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.39■□□□□ 0.21
PCDHGA11Q9Y5H2 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGA11Q9Y5H2 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGA11Q9Y5H2 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGA11Q9Y5H2 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms