Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
PCDHGA6Q9Y5G7 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA6Q9Y5G7 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHGA6Q9Y5G7 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA6Q9Y5G7 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
PCDHGA6Q9Y5G7 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.31■□□□□ 0.2
PCDHGA6Q9Y5G7 AC097637.2-201ENST00000624096 1997 ntBASIC16.31■□□□□ 0.2
PCDHGA6Q9Y5G7 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHGA6Q9Y5G7 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHGA6Q9Y5G7 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHGA6Q9Y5G7 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.31■□□□□ 0.2
PCDHGA6Q9Y5G7 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA6Q9Y5G7 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHGA6Q9Y5G7 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PCDHGA6Q9Y5G7 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.31■□□□□ 0.2
PCDHGA6Q9Y5G7 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PCDHGA6Q9Y5G7 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PCDHGA6Q9Y5G7 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PCDHGA6Q9Y5G7 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.31■□□□□ 0.2
PCDHGA6Q9Y5G7 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA6Q9Y5G7 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA6Q9Y5G7 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PCDHGA6Q9Y5G7 PTCHD3P3-201ENST00000403073 906 ntBASIC16.31■□□□□ 0.2
PCDHGA6Q9Y5G7 IGLL3P-201ENST00000412472 434 ntBASIC16.31■□□□□ 0.2
PCDHGA6Q9Y5G7 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.31■□□□□ 0.2
PCDHGA6Q9Y5G7 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
PCDHGA6Q9Y5G7 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.31■□□□□ 0.2
PCDHGA6Q9Y5G7 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
PCDHGA6Q9Y5G7 HMGN1P19-201ENST00000436976 333 ntBASIC16.31■□□□□ 0.2
PCDHGA6Q9Y5G7 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.31■□□□□ 0.2
PCDHGA6Q9Y5G7 AC096734.2-201ENST00000562054 433 ntBASIC16.31■□□□□ 0.2
PCDHGA6Q9Y5G7 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHGA6Q9Y5G7 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.31■□□□□ 0.2
PCDHGA6Q9Y5G7 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.31■□□□□ 0.2
PCDHGA6Q9Y5G7 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA6Q9Y5G7 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PCDHGA6Q9Y5G7 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA6Q9Y5G7 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.31■□□□□ 0.2
PCDHGA6Q9Y5G7 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
PCDHGA6Q9Y5G7 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHGA6Q9Y5G7 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.31■□□□□ 0.2
PCDHGA6Q9Y5G7 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.31■□□□□ 0.2
PCDHGA6Q9Y5G7 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
PCDHGA6Q9Y5G7 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.31■□□□□ 0.2
PCDHGA6Q9Y5G7 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA6Q9Y5G7 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
PCDHGA6Q9Y5G7 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA6Q9Y5G7 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PCDHGA6Q9Y5G7 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PCDHGA6Q9Y5G7 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA6Q9Y5G7 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA6Q9Y5G7 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA6Q9Y5G7 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.3■□□□□ 0.2
PCDHGA6Q9Y5G7 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA6Q9Y5G7 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA6Q9Y5G7 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.3■□□□□ 0.2
PCDHGA6Q9Y5G7 AC046158.3-201ENST00000624947 2558 ntBASIC16.3■□□□□ 0.2
PCDHGA6Q9Y5G7 REXO1L11P-201ENST00000620964 1927 ntBASIC16.3■□□□□ 0.2
PCDHGA6Q9Y5G7 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
PCDHGA6Q9Y5G7 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA6Q9Y5G7 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.3■□□□□ 0.2
PCDHGA6Q9Y5G7 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.3■□□□□ 0.2
PCDHGA6Q9Y5G7 LINC00982-205ENST00000420957 435 ntBASIC16.3■□□□□ 0.2
PCDHGA6Q9Y5G7 HTR5BP-201ENST00000430851 1154 ntBASIC16.3■□□□□ 0.2
PCDHGA6Q9Y5G7 ALG1L5P-201ENST00000482043 771 ntBASIC16.3■□□□□ 0.2
PCDHGA6Q9Y5G7 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.3■□□□□ 0.2
PCDHGA6Q9Y5G7 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
PCDHGA6Q9Y5G7 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.3■□□□□ 0.2
PCDHGA6Q9Y5G7 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
PCDHGA6Q9Y5G7 AC018845.2-201ENST00000568326 409 ntBASIC16.3■□□□□ 0.2
PCDHGA6Q9Y5G7 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.3■□□□□ 0.2
PCDHGA6Q9Y5G7 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.3■□□□□ 0.2
PCDHGA6Q9Y5G7 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
PCDHGA6Q9Y5G7 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA6Q9Y5G7 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA6Q9Y5G7 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.3■□□□□ 0.2
PCDHGA6Q9Y5G7 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.3■□□□□ 0.2
PCDHGA6Q9Y5G7 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA6Q9Y5G7 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PCDHGA6Q9Y5G7 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
PCDHGA6Q9Y5G7 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.3■□□□□ 0.2
PCDHGA6Q9Y5G7 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA6Q9Y5G7 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PCDHGA6Q9Y5G7 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA6Q9Y5G7 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA6Q9Y5G7 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.3■□□□□ 0.2
PCDHGA6Q9Y5G7 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA6Q9Y5G7 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PCDHGA6Q9Y5G7 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA6Q9Y5G7 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA6Q9Y5G7 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA6Q9Y5G7 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PCDHGA6Q9Y5G7 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
PCDHGA6Q9Y5G7 PCDH8P1-201ENST00000428983 2773 ntBASIC16.29■□□□□ 0.2
PCDHGA6Q9Y5G7 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
PCDHGA6Q9Y5G7 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA6Q9Y5G7 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA6Q9Y5G7 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA6Q9Y5G7 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA6Q9Y5G7 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms