Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.54■□□□□ 0.08
PCDHGB1Q9Y5G3 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGB1Q9Y5G3 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.54■□□□□ 0.08
PCDHGB1Q9Y5G3 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGB1Q9Y5G3 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGB1Q9Y5G3 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
PCDHGB1Q9Y5G3 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGB1Q9Y5G3 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGB1Q9Y5G3 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.54■□□□□ 0.08
PCDHGB1Q9Y5G3 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.54■□□□□ 0.08
PCDHGB1Q9Y5G3 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGB1Q9Y5G3 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.53■□□□□ 0.08
PCDHGB1Q9Y5G3 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGB1Q9Y5G3 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGB1Q9Y5G3 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGB1Q9Y5G3 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGB1Q9Y5G3 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
PCDHGB1Q9Y5G3 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC15.53■□□□□ 0.08
PCDHGB1Q9Y5G3 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
PCDHGB1Q9Y5G3 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.53■□□□□ 0.08
PCDHGB1Q9Y5G3 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGB1Q9Y5G3 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
PCDHGB1Q9Y5G3 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
PCDHGB1Q9Y5G3 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
PCDHGB1Q9Y5G3 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGB1Q9Y5G3 FAM8A6P-201ENST00000407496 1135 ntBASIC15.53■□□□□ 0.08
PCDHGB1Q9Y5G3 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC15.53■□□□□ 0.08
PCDHGB1Q9Y5G3 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC15.53■□□□□ 0.08
PCDHGB1Q9Y5G3 BX664615.1-201ENST00000443558 458 ntBASIC15.53■□□□□ 0.08
PCDHGB1Q9Y5G3 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
PCDHGB1Q9Y5G3 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC15.53■□□□□ 0.08
PCDHGB1Q9Y5G3 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC15.53■□□□□ 0.08
PCDHGB1Q9Y5G3 AC141257.4-201ENST00000634557 245 ntBASIC15.53■□□□□ 0.08
PCDHGB1Q9Y5G3 AC136944.6-201ENST00000634818 245 ntBASIC15.53■□□□□ 0.08
PCDHGB1Q9Y5G3 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.53■□□□□ 0.08
PCDHGB1Q9Y5G3 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGB1Q9Y5G3 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.53■□□□□ 0.08
PCDHGB1Q9Y5G3 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.53■□□□□ 0.08
PCDHGB1Q9Y5G3 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.53■□□□□ 0.08
PCDHGB1Q9Y5G3 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGB1Q9Y5G3 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGB1Q9Y5G3 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGB1Q9Y5G3 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGB1Q9Y5G3 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGB1Q9Y5G3 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGB1Q9Y5G3 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGB1Q9Y5G3 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGB1Q9Y5G3 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.52■□□□□ 0.08
PCDHGB1Q9Y5G3 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGB1Q9Y5G3 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGB1Q9Y5G3 AC144831.1-201ENST00000573312 2656 ntBASIC15.52■□□□□ 0.08
PCDHGB1Q9Y5G3 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGB1Q9Y5G3 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGB1Q9Y5G3 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGB1Q9Y5G3 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGB1Q9Y5G3 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGB1Q9Y5G3 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.52■□□□□ 0.08
PCDHGB1Q9Y5G3 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGB1Q9Y5G3 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGB1Q9Y5G3 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGB1Q9Y5G3 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGB1Q9Y5G3 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGB1Q9Y5G3 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGB1Q9Y5G3 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGB1Q9Y5G3 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGB1Q9Y5G3 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGB1Q9Y5G3 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
PCDHGB1Q9Y5G3 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC15.52■□□□□ 0.08
PCDHGB1Q9Y5G3 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.52■□□□□ 0.08
PCDHGB1Q9Y5G3 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC15.52■□□□□ 0.08
PCDHGB1Q9Y5G3 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGB1Q9Y5G3 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGB1Q9Y5G3 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.52■□□□□ 0.08
PCDHGB1Q9Y5G3 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGB1Q9Y5G3 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC15.52■□□□□ 0.08
PCDHGB1Q9Y5G3 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGB1Q9Y5G3 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGB1Q9Y5G3 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGB1Q9Y5G3 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHGB1Q9Y5G3 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.52■□□□□ 0.07
PCDHGB1Q9Y5G3 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHGB1Q9Y5G3 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHGB1Q9Y5G3 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.52■□□□□ 0.07
PCDHGB1Q9Y5G3 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.52■□□□□ 0.07
PCDHGB1Q9Y5G3 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
PCDHGB1Q9Y5G3 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
PCDHGB1Q9Y5G3 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.52■□□□□ 0.07
PCDHGB1Q9Y5G3 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHGB1Q9Y5G3 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
PCDHGB1Q9Y5G3 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHGB1Q9Y5G3 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHGB1Q9Y5G3 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
PCDHGB1Q9Y5G3 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
PCDHGB1Q9Y5G3 AL603832.2-201ENST00000566195 2125 ntBASIC15.52■□□□□ 0.07
PCDHGB1Q9Y5G3 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB1Q9Y5G3 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB1Q9Y5G3 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB1Q9Y5G3 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB1Q9Y5G3 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGB1Q9Y5G3 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms