Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC14.2□□□□□ -0.14
KCNIP3Q9Y2W7 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC14.2□□□□□ -0.14
KCNIP3Q9Y2W7 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
KCNIP3Q9Y2W7 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
KCNIP3Q9Y2W7 INGX-201ENST00000359239 846 ntBASIC14.2□□□□□ -0.14
KCNIP3Q9Y2W7 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
KCNIP3Q9Y2W7 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
KCNIP3Q9Y2W7 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
KCNIP3Q9Y2W7 AL158047.1-201ENST00000445918 881 ntBASIC14.2□□□□□ -0.14
KCNIP3Q9Y2W7 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC14.2□□□□□ -0.14
KCNIP3Q9Y2W7 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC14.2□□□□□ -0.14
KCNIP3Q9Y2W7 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
KCNIP3Q9Y2W7 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
KCNIP3Q9Y2W7 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC14.2□□□□□ -0.14
KCNIP3Q9Y2W7 DHDH-203ENST00000522614 776 ntTSL 5 BASIC14.2□□□□□ -0.14
KCNIP3Q9Y2W7 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC14.2□□□□□ -0.14
KCNIP3Q9Y2W7 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC14.2□□□□□ -0.14
KCNIP3Q9Y2W7 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
KCNIP3Q9Y2W7 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
KCNIP3Q9Y2W7 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC14.2□□□□□ -0.14
KCNIP3Q9Y2W7 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
KCNIP3Q9Y2W7 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
KCNIP3Q9Y2W7 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
KCNIP3Q9Y2W7 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
KCNIP3Q9Y2W7 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.2□□□□□ -0.14
KCNIP3Q9Y2W7 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
KCNIP3Q9Y2W7 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
KCNIP3Q9Y2W7 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.2□□□□□ -0.14
KCNIP3Q9Y2W7 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
KCNIP3Q9Y2W7 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
KCNIP3Q9Y2W7 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.2□□□□□ -0.14
KCNIP3Q9Y2W7 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
KCNIP3Q9Y2W7 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
KCNIP3Q9Y2W7 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
KCNIP3Q9Y2W7 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.2□□□□□ -0.14
KCNIP3Q9Y2W7 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.19□□□□□ -0.14
KCNIP3Q9Y2W7 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KCNIP3Q9Y2W7 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
KCNIP3Q9Y2W7 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
KCNIP3Q9Y2W7 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
KCNIP3Q9Y2W7 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
KCNIP3Q9Y2W7 GPR89P-201ENST00000407924 1495 ntBASIC14.19□□□□□ -0.14
KCNIP3Q9Y2W7 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KCNIP3Q9Y2W7 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KCNIP3Q9Y2W7 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
KCNIP3Q9Y2W7 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KCNIP3Q9Y2W7 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
KCNIP3Q9Y2W7 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
KCNIP3Q9Y2W7 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.19□□□□□ -0.14
KCNIP3Q9Y2W7 AL391256.1-201ENST00000443260 1855 ntBASIC14.19□□□□□ -0.14
KCNIP3Q9Y2W7 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
KCNIP3Q9Y2W7 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KCNIP3Q9Y2W7 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
KCNIP3Q9Y2W7 AC006538.1-201ENST00000567905 1585 ntBASIC14.19□□□□□ -0.14
KCNIP3Q9Y2W7 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KCNIP3Q9Y2W7 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KCNIP3Q9Y2W7 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KCNIP3Q9Y2W7 FAM8A6P-201ENST00000407496 1135 ntBASIC14.19□□□□□ -0.14
KCNIP3Q9Y2W7 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC14.19□□□□□ -0.14
KCNIP3Q9Y2W7 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC14.19□□□□□ -0.14
KCNIP3Q9Y2W7 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KCNIP3Q9Y2W7 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC14.19□□□□□ -0.14
KCNIP3Q9Y2W7 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
KCNIP3Q9Y2W7 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC14.19□□□□□ -0.14
KCNIP3Q9Y2W7 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
KCNIP3Q9Y2W7 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
KCNIP3Q9Y2W7 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
KCNIP3Q9Y2W7 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
KCNIP3Q9Y2W7 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
KCNIP3Q9Y2W7 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.19□□□□□ -0.14
KCNIP3Q9Y2W7 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KCNIP3Q9Y2W7 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KCNIP3Q9Y2W7 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
KCNIP3Q9Y2W7 PCDHA3-202ENST00000532566 4594 ntBASIC14.19□□□□□ -0.14
KCNIP3Q9Y2W7 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
KCNIP3Q9Y2W7 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KCNIP3Q9Y2W7 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.19□□□□□ -0.14
KCNIP3Q9Y2W7 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
KCNIP3Q9Y2W7 AL353692.3-201ENST00000407031 1396 ntBASIC14.19□□□□□ -0.14
KCNIP3Q9Y2W7 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.19□□□□□ -0.14
KCNIP3Q9Y2W7 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KCNIP3Q9Y2W7 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
KCNIP3Q9Y2W7 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
KCNIP3Q9Y2W7 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
KCNIP3Q9Y2W7 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KCNIP3Q9Y2W7 PAUPAR-201ENST00000630360 2965 ntBASIC14.19□□□□□ -0.14
KCNIP3Q9Y2W7 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
KCNIP3Q9Y2W7 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KCNIP3Q9Y2W7 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KCNIP3Q9Y2W7 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
KCNIP3Q9Y2W7 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
KCNIP3Q9Y2W7 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.18□□□□□ -0.14
KCNIP3Q9Y2W7 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
KCNIP3Q9Y2W7 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KCNIP3Q9Y2W7 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
KCNIP3Q9Y2W7 MME-217ENST00000616757 1315 ntTSL 5 BASIC14.18□□□□□ -0.14
KCNIP3Q9Y2W7 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
KCNIP3Q9Y2W7 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KCNIP3Q9Y2W7 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
KCNIP3Q9Y2W7 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms