Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGC3Q9UN70 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGC3Q9UN70 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGC3Q9UN70 AL118508.1-201ENST00000613502 2345 ntBASIC17.78■□□□□ 0.44
PCDHGC3Q9UN70 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGC3Q9UN70 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGC3Q9UN70 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGC3Q9UN70 UBALD1-205ENST00000590891 2641 ntBASIC17.78■□□□□ 0.44
PCDHGC3Q9UN70 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGC3Q9UN70 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDHGC3Q9UN70 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHGC3Q9UN70 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
PCDHGC3Q9UN70 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.77■□□□□ 0.44
PCDHGC3Q9UN70 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.77■□□□□ 0.44
PCDHGC3Q9UN70 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGC3Q9UN70 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGC3Q9UN70 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
PCDHGC3Q9UN70 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGC3Q9UN70 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
PCDHGC3Q9UN70 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGC3Q9UN70 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGC3Q9UN70 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
PCDHGC3Q9UN70 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.77■□□□□ 0.44
PCDHGC3Q9UN70 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
PCDHGC3Q9UN70 AL590627.1-203ENST00000421194 1026 ntBASIC17.77■□□□□ 0.44
PCDHGC3Q9UN70 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.77■□□□□ 0.44
PCDHGC3Q9UN70 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.77■□□□□ 0.44
PCDHGC3Q9UN70 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.77■□□□□ 0.44
PCDHGC3Q9UN70 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.77■□□□□ 0.44
PCDHGC3Q9UN70 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGC3Q9UN70 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.77■□□□□ 0.44
PCDHGC3Q9UN70 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHGC3Q9UN70 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.77■□□□□ 0.44
PCDHGC3Q9UN70 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHGC3Q9UN70 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.77■□□□□ 0.43
PCDHGC3Q9UN70 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
PCDHGC3Q9UN70 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.77■□□□□ 0.43
PCDHGC3Q9UN70 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHGC3Q9UN70 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHGC3Q9UN70 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDHGC3Q9UN70 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGC3Q9UN70 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGC3Q9UN70 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDHGC3Q9UN70 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGC3Q9UN70 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.76■□□□□ 0.43
PCDHGC3Q9UN70 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGC3Q9UN70 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGC3Q9UN70 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGC3Q9UN70 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGC3Q9UN70 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGC3Q9UN70 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDHGC3Q9UN70 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGC3Q9UN70 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
PCDHGC3Q9UN70 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGC3Q9UN70 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PCDHGC3Q9UN70 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDHGC3Q9UN70 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDHGC3Q9UN70 AC010507.1-201ENST00000633895 436 ntBASIC17.76■□□□□ 0.43
PCDHGC3Q9UN70 AL645728.2-201ENST00000641974 660 ntBASIC17.76■□□□□ 0.43
PCDHGC3Q9UN70 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGC3Q9UN70 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGC3Q9UN70 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDHGC3Q9UN70 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGC3Q9UN70 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.76■□□□□ 0.43
PCDHGC3Q9UN70 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PCDHGC3Q9UN70 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGC3Q9UN70 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
PCDHGC3Q9UN70 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGC3Q9UN70 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.76■□□□□ 0.43
PCDHGC3Q9UN70 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
PCDHGC3Q9UN70 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
PCDHGC3Q9UN70 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.76■□□□□ 0.43
PCDHGC3Q9UN70 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGC3Q9UN70 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGC3Q9UN70 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGC3Q9UN70 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGC3Q9UN70 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.75■□□□□ 0.43
PCDHGC3Q9UN70 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGC3Q9UN70 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
PCDHGC3Q9UN70 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHGC3Q9UN70 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGC3Q9UN70 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
PCDHGC3Q9UN70 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHGC3Q9UN70 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGC3Q9UN70 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHGC3Q9UN70 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PCDHGC3Q9UN70 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.75■□□□□ 0.43
PCDHGC3Q9UN70 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGC3Q9UN70 AL513480.1-201ENST00000451731 511 ntBASIC17.75■□□□□ 0.43
PCDHGC3Q9UN70 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHGC3Q9UN70 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.75■□□□□ 0.43
PCDHGC3Q9UN70 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
PCDHGC3Q9UN70 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.75■□□□□ 0.43
PCDHGC3Q9UN70 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGC3Q9UN70 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHGC3Q9UN70 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.75■□□□□ 0.43
PCDHGC3Q9UN70 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
PCDHGC3Q9UN70 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHGC3Q9UN70 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
PCDHGC3Q9UN70 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms