Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.84■□□□□ 0.29
SPASTQ9UBP0 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.84■□□□□ 0.29
SPASTQ9UBP0 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.84■□□□□ 0.29
SPASTQ9UBP0 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SPASTQ9UBP0 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SPASTQ9UBP0 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.84■□□□□ 0.29
SPASTQ9UBP0 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SPASTQ9UBP0 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.84■□□□□ 0.29
SPASTQ9UBP0 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SPASTQ9UBP0 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.84■□□□□ 0.29
SPASTQ9UBP0 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SPASTQ9UBP0 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.84■□□□□ 0.29
SPASTQ9UBP0 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.84■□□□□ 0.29
SPASTQ9UBP0 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SPASTQ9UBP0 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.84■□□□□ 0.29
SPASTQ9UBP0 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
SPASTQ9UBP0 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SPASTQ9UBP0 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
SPASTQ9UBP0 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
SPASTQ9UBP0 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SPASTQ9UBP0 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
SPASTQ9UBP0 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SPASTQ9UBP0 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SPASTQ9UBP0 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
SPASTQ9UBP0 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SPASTQ9UBP0 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.83■□□□□ 0.28
SPASTQ9UBP0 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.83■□□□□ 0.28
SPASTQ9UBP0 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.83■□□□□ 0.28
SPASTQ9UBP0 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
SPASTQ9UBP0 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
SPASTQ9UBP0 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SPASTQ9UBP0 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
SPASTQ9UBP0 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.83■□□□□ 0.28
SPASTQ9UBP0 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.83■□□□□ 0.28
SPASTQ9UBP0 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.83■□□□□ 0.28
SPASTQ9UBP0 CNN2P11-201ENST00000429351 262 ntBASIC16.83■□□□□ 0.28
SPASTQ9UBP0 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SPASTQ9UBP0 FAM58CP-201ENST00000435741 640 ntBASIC16.83■□□□□ 0.28
SPASTQ9UBP0 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.83■□□□□ 0.28
SPASTQ9UBP0 FAM185BP-201ENST00000443595 716 ntBASIC16.83■□□□□ 0.28
SPASTQ9UBP0 PAWRP1-201ENST00000451083 565 ntBASIC16.83■□□□□ 0.28
SPASTQ9UBP0 KRT18P28-201ENST00000453838 1332 ntBASIC16.83■□□□□ 0.28
SPASTQ9UBP0 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SPASTQ9UBP0 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.83■□□□□ 0.28
SPASTQ9UBP0 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SPASTQ9UBP0 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.83■□□□□ 0.28
SPASTQ9UBP0 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SPASTQ9UBP0 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
SPASTQ9UBP0 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.28
SPASTQ9UBP0 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
SPASTQ9UBP0 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SPASTQ9UBP0 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SPASTQ9UBP0 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
SPASTQ9UBP0 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SPASTQ9UBP0 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.82■□□□□ 0.28
SPASTQ9UBP0 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
SPASTQ9UBP0 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SPASTQ9UBP0 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SPASTQ9UBP0 AC108860.2-201ENST00000562760 2183 ntBASIC16.82■□□□□ 0.28
SPASTQ9UBP0 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.82■□□□□ 0.28
SPASTQ9UBP0 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SPASTQ9UBP0 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SPASTQ9UBP0 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.82■□□□□ 0.28
SPASTQ9UBP0 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SPASTQ9UBP0 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
SPASTQ9UBP0 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SPASTQ9UBP0 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SPASTQ9UBP0 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SPASTQ9UBP0 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SPASTQ9UBP0 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.82■□□□□ 0.28
SPASTQ9UBP0 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
SPASTQ9UBP0 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SPASTQ9UBP0 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SPASTQ9UBP0 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SPASTQ9UBP0 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SPASTQ9UBP0 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.82■□□□□ 0.28
SPASTQ9UBP0 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SPASTQ9UBP0 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.82■□□□□ 0.28
SPASTQ9UBP0 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.82■□□□□ 0.28
SPASTQ9UBP0 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.82■□□□□ 0.28
SPASTQ9UBP0 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SPASTQ9UBP0 AC080080.1-201ENST00000625121 2420 ntBASIC16.82■□□□□ 0.28
SPASTQ9UBP0 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SPASTQ9UBP0 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SPASTQ9UBP0 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SPASTQ9UBP0 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SPASTQ9UBP0 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SPASTQ9UBP0 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SPASTQ9UBP0 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SPASTQ9UBP0 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SPASTQ9UBP0 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
SPASTQ9UBP0 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SPASTQ9UBP0 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.82■□□□□ 0.28
SPASTQ9UBP0 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.82■□□□□ 0.28
SPASTQ9UBP0 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
SPASTQ9UBP0 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.82■□□□□ 0.28
SPASTQ9UBP0 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.82■□□□□ 0.28
SPASTQ9UBP0 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
SPASTQ9UBP0 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SPASTQ9UBP0 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms