Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
GCM1Q9NP62 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GCM1Q9NP62 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
GCM1Q9NP62 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
GCM1Q9NP62 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
GCM1Q9NP62 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GCM1Q9NP62 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GCM1Q9NP62 ZNF259P1-201ENST00000407656 1365 ntBASIC14.47□□□□□ -0.09
GCM1Q9NP62 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
GCM1Q9NP62 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GCM1Q9NP62 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GCM1Q9NP62 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GCM1Q9NP62 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
GCM1Q9NP62 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
GCM1Q9NP62 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GCM1Q9NP62 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GCM1Q9NP62 PRORSD1P-202ENST00000563365 2154 ntBASIC14.46□□□□□ -0.09
GCM1Q9NP62 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC14.46□□□□□ -0.09
GCM1Q9NP62 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
GCM1Q9NP62 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.46□□□□□ -0.09
GCM1Q9NP62 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GCM1Q9NP62 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
GCM1Q9NP62 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC14.46□□□□□ -0.09
GCM1Q9NP62 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
GCM1Q9NP62 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.46□□□□□ -0.09
GCM1Q9NP62 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GCM1Q9NP62 AC108073.2-201ENST00000464002 357 ntBASIC14.46□□□□□ -0.09
GCM1Q9NP62 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.46□□□□□ -0.09
GCM1Q9NP62 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.46□□□□□ -0.09
GCM1Q9NP62 AC106730.1-201ENST00000566722 1090 ntBASIC14.46□□□□□ -0.09
GCM1Q9NP62 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.46□□□□□ -0.09
GCM1Q9NP62 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.46□□□□□ -0.09
GCM1Q9NP62 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.46□□□□□ -0.09
GCM1Q9NP62 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GCM1Q9NP62 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GCM1Q9NP62 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GCM1Q9NP62 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
GCM1Q9NP62 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GCM1Q9NP62 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GCM1Q9NP62 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC14.46□□□□□ -0.1
GCM1Q9NP62 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
GCM1Q9NP62 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
GCM1Q9NP62 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
GCM1Q9NP62 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
GCM1Q9NP62 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
GCM1Q9NP62 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.46□□□□□ -0.1
GCM1Q9NP62 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
GCM1Q9NP62 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
GCM1Q9NP62 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
GCM1Q9NP62 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
GCM1Q9NP62 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GCM1Q9NP62 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.45□□□□□ -0.1
GCM1Q9NP62 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GCM1Q9NP62 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
GCM1Q9NP62 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC14.45□□□□□ -0.1
GCM1Q9NP62 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
GCM1Q9NP62 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.45□□□□□ -0.1
GCM1Q9NP62 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GCM1Q9NP62 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GCM1Q9NP62 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.45□□□□□ -0.1
GCM1Q9NP62 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.45□□□□□ -0.1
GCM1Q9NP62 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GCM1Q9NP62 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC14.45□□□□□ -0.1
GCM1Q9NP62 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GCM1Q9NP62 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC14.45□□□□□ -0.1
GCM1Q9NP62 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.45□□□□□ -0.1
GCM1Q9NP62 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.45□□□□□ -0.1
GCM1Q9NP62 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.45□□□□□ -0.1
GCM1Q9NP62 AC034105.1-201ENST00000563488 319 ntBASIC14.45□□□□□ -0.1
GCM1Q9NP62 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
GCM1Q9NP62 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.45□□□□□ -0.1
GCM1Q9NP62 AC004790.2-201ENST00000623588 572 ntBASIC14.45□□□□□ -0.1
GCM1Q9NP62 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GCM1Q9NP62 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
GCM1Q9NP62 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GCM1Q9NP62 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GCM1Q9NP62 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GCM1Q9NP62 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
GCM1Q9NP62 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC14.45□□□□□ -0.1
GCM1Q9NP62 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
GCM1Q9NP62 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
GCM1Q9NP62 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
GCM1Q9NP62 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GCM1Q9NP62 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
GCM1Q9NP62 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GCM1Q9NP62 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
GCM1Q9NP62 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
GCM1Q9NP62 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
GCM1Q9NP62 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GCM1Q9NP62 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GCM1Q9NP62 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC14.44□□□□□ -0.1
GCM1Q9NP62 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
GCM1Q9NP62 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GCM1Q9NP62 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
GCM1Q9NP62 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GCM1Q9NP62 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GCM1Q9NP62 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
GCM1Q9NP62 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GCM1Q9NP62 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
GCM1Q9NP62 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms