Protein–RNA interactions for Protein: Q9HCU9

BRMS1, Breast cancer metastasis-suppressor 1, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRMS1Q9HCU9 AC087163.2-201ENST00000457299 853 ntBASIC19.53■□□□□ 0.72
BRMS1Q9HCU9 AL662844.1-201ENST00000546340 181 ntBASIC19.53■□□□□ 0.72
BRMS1Q9HCU9 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
BRMS1Q9HCU9 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
BRMS1Q9HCU9 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
BRMS1Q9HCU9 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
BRMS1Q9HCU9 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
BRMS1Q9HCU9 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
BRMS1Q9HCU9 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.53■□□□□ 0.72
BRMS1Q9HCU9 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
BRMS1Q9HCU9 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
BRMS1Q9HCU9 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
BRMS1Q9HCU9 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
BRMS1Q9HCU9 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
BRMS1Q9HCU9 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
BRMS1Q9HCU9 PCDHB17P-201ENST00000539533 2393 ntBASIC19.52■□□□□ 0.72
BRMS1Q9HCU9 NF2-208ENST00000403435 2568 ntTSL 5 BASIC19.52■□□□□ 0.72
BRMS1Q9HCU9 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
BRMS1Q9HCU9 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
BRMS1Q9HCU9 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
BRMS1Q9HCU9 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
BRMS1Q9HCU9 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC19.52■□□□□ 0.72
BRMS1Q9HCU9 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
BRMS1Q9HCU9 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
BRMS1Q9HCU9 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
BRMS1Q9HCU9 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.52■□□□□ 0.72
BRMS1Q9HCU9 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
BRMS1Q9HCU9 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
BRMS1Q9HCU9 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
BRMS1Q9HCU9 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.52■□□□□ 0.72
BRMS1Q9HCU9 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
BRMS1Q9HCU9 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.52■□□□□ 0.72
BRMS1Q9HCU9 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.52■□□□□ 0.72
BRMS1Q9HCU9 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
BRMS1Q9HCU9 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.52■□□□□ 0.72
BRMS1Q9HCU9 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.52■□□□□ 0.72
BRMS1Q9HCU9 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
BRMS1Q9HCU9 PRKN-208ENST00000610470 531 ntTSL 2 BASIC19.52■□□□□ 0.72
BRMS1Q9HCU9 PRKN-209ENST00000612485 225 ntTSL 5 BASIC19.52■□□□□ 0.72
BRMS1Q9HCU9 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.52■□□□□ 0.72
BRMS1Q9HCU9 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
BRMS1Q9HCU9 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
BRMS1Q9HCU9 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
BRMS1Q9HCU9 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
BRMS1Q9HCU9 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
BRMS1Q9HCU9 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
BRMS1Q9HCU9 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
BRMS1Q9HCU9 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
BRMS1Q9HCU9 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
BRMS1Q9HCU9 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
BRMS1Q9HCU9 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
BRMS1Q9HCU9 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC19.51■□□□□ 0.71
BRMS1Q9HCU9 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
BRMS1Q9HCU9 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
BRMS1Q9HCU9 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
BRMS1Q9HCU9 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
BRMS1Q9HCU9 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC19.51■□□□□ 0.71
BRMS1Q9HCU9 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
BRMS1Q9HCU9 AC084018.2-201ENST00000613093 2607 ntBASIC19.51■□□□□ 0.71
BRMS1Q9HCU9 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC19.51■□□□□ 0.71
BRMS1Q9HCU9 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
BRMS1Q9HCU9 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.51■□□□□ 0.71
BRMS1Q9HCU9 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.51■□□□□ 0.71
BRMS1Q9HCU9 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC19.51■□□□□ 0.71
BRMS1Q9HCU9 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
BRMS1Q9HCU9 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.51■□□□□ 0.71
BRMS1Q9HCU9 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.51■□□□□ 0.71
BRMS1Q9HCU9 AC008667.4-201ENST00000607370 168 ntBASIC19.51■□□□□ 0.71
BRMS1Q9HCU9 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.51■□□□□ 0.71
BRMS1Q9HCU9 TOP3BP1-201ENST00000420768 1380 ntBASIC19.51■□□□□ 0.71
BRMS1Q9HCU9 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
BRMS1Q9HCU9 AP002414.3-201ENST00000589352 1468 ntBASIC19.51■□□□□ 0.71
BRMS1Q9HCU9 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
BRMS1Q9HCU9 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.51■□□□□ 0.71
BRMS1Q9HCU9 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
BRMS1Q9HCU9 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
BRMS1Q9HCU9 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
BRMS1Q9HCU9 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
BRMS1Q9HCU9 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
BRMS1Q9HCU9 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC19.51■□□□□ 0.71
BRMS1Q9HCU9 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
BRMS1Q9HCU9 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC19.51■□□□□ 0.71
BRMS1Q9HCU9 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC19.51■□□□□ 0.71
BRMS1Q9HCU9 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
BRMS1Q9HCU9 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
BRMS1Q9HCU9 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
BRMS1Q9HCU9 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC19.5■□□□□ 0.71
BRMS1Q9HCU9 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
BRMS1Q9HCU9 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.5■□□□□ 0.71
BRMS1Q9HCU9 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.5■□□□□ 0.71
BRMS1Q9HCU9 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.5■□□□□ 0.71
BRMS1Q9HCU9 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.5■□□□□ 0.71
BRMS1Q9HCU9 AC012640.2-201ENST00000561606 901 ntBASIC19.5■□□□□ 0.71
BRMS1Q9HCU9 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.5■□□□□ 0.71
BRMS1Q9HCU9 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
BRMS1Q9HCU9 AC011676.5-201ENST00000624864 2660 ntBASIC19.5■□□□□ 0.71
BRMS1Q9HCU9 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
BRMS1Q9HCU9 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
BRMS1Q9HCU9 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC19.5■□□□□ 0.71
BRMS1Q9HCU9 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms