Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
POLR1EQ9GZS1 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.11■□□□□ 0.33
POLR1EQ9GZS1 ACTL9-202ENST00000612068 1252 ntBASIC17.11■□□□□ 0.33
POLR1EQ9GZS1 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.11■□□□□ 0.33
POLR1EQ9GZS1 AP001350.2-201ENST00000625104 1094 ntBASIC17.11■□□□□ 0.33
POLR1EQ9GZS1 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.11■□□□□ 0.33
POLR1EQ9GZS1 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
POLR1EQ9GZS1 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.11■□□□□ 0.33
POLR1EQ9GZS1 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.11■□□□□ 0.33
POLR1EQ9GZS1 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
POLR1EQ9GZS1 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.11■□□□□ 0.33
POLR1EQ9GZS1 NKILA-202ENST00000614771 2598 ntBASIC17.11■□□□□ 0.33
POLR1EQ9GZS1 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
POLR1EQ9GZS1 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
POLR1EQ9GZS1 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
POLR1EQ9GZS1 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
POLR1EQ9GZS1 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.11■□□□□ 0.33
POLR1EQ9GZS1 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
POLR1EQ9GZS1 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
POLR1EQ9GZS1 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
POLR1EQ9GZS1 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
POLR1EQ9GZS1 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
POLR1EQ9GZS1 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.11■□□□□ 0.33
POLR1EQ9GZS1 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
POLR1EQ9GZS1 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
POLR1EQ9GZS1 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLR1EQ9GZS1 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLR1EQ9GZS1 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
POLR1EQ9GZS1 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLR1EQ9GZS1 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLR1EQ9GZS1 SLC22A20-204ENST00000530038 1673 ntBASIC17.1■□□□□ 0.33
POLR1EQ9GZS1 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
POLR1EQ9GZS1 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
POLR1EQ9GZS1 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
POLR1EQ9GZS1 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
POLR1EQ9GZS1 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLR1EQ9GZS1 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLR1EQ9GZS1 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
POLR1EQ9GZS1 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.1■□□□□ 0.33
POLR1EQ9GZS1 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
POLR1EQ9GZS1 PMS2P1-201ENST00000431037 1228 ntBASIC17.1■□□□□ 0.33
POLR1EQ9GZS1 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.1■□□□□ 0.33
POLR1EQ9GZS1 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.1■□□□□ 0.33
POLR1EQ9GZS1 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.1■□□□□ 0.33
POLR1EQ9GZS1 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.1■□□□□ 0.33
POLR1EQ9GZS1 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLR1EQ9GZS1 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.1■□□□□ 0.33
POLR1EQ9GZS1 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.1■□□□□ 0.33
POLR1EQ9GZS1 MIR4492-201ENST00000581627 80 ntBASIC17.1■□□□□ 0.33
POLR1EQ9GZS1 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.1■□□□□ 0.33
POLR1EQ9GZS1 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
POLR1EQ9GZS1 AC064836.3-201ENST00000607928 673 ntBASIC17.1■□□□□ 0.33
POLR1EQ9GZS1 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
POLR1EQ9GZS1 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLR1EQ9GZS1 AC009053.2-201ENST00000563701 2365 ntBASIC17.1■□□□□ 0.33
POLR1EQ9GZS1 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.1■□□□□ 0.33
POLR1EQ9GZS1 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
POLR1EQ9GZS1 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLR1EQ9GZS1 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
POLR1EQ9GZS1 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
POLR1EQ9GZS1 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
POLR1EQ9GZS1 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
POLR1EQ9GZS1 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLR1EQ9GZS1 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
POLR1EQ9GZS1 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLR1EQ9GZS1 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLR1EQ9GZS1 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLR1EQ9GZS1 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
POLR1EQ9GZS1 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLR1EQ9GZS1 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
POLR1EQ9GZS1 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.09■□□□□ 0.33
POLR1EQ9GZS1 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
POLR1EQ9GZS1 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
POLR1EQ9GZS1 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
POLR1EQ9GZS1 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.09■□□□□ 0.33
POLR1EQ9GZS1 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
POLR1EQ9GZS1 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
POLR1EQ9GZS1 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.09■□□□□ 0.33
POLR1EQ9GZS1 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.09■□□□□ 0.33
POLR1EQ9GZS1 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
POLR1EQ9GZS1 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
POLR1EQ9GZS1 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.09■□□□□ 0.33
POLR1EQ9GZS1 AL591424.1-201ENST00000442569 1213 ntBASIC17.09■□□□□ 0.33
POLR1EQ9GZS1 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
POLR1EQ9GZS1 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.09■□□□□ 0.33
POLR1EQ9GZS1 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.09■□□□□ 0.33
POLR1EQ9GZS1 AC087641.1-201ENST00000557561 1021 ntBASIC17.09■□□□□ 0.33
POLR1EQ9GZS1 AC096734.2-201ENST00000562054 433 ntBASIC17.09■□□□□ 0.33
POLR1EQ9GZS1 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
POLR1EQ9GZS1 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.09■□□□□ 0.33
POLR1EQ9GZS1 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.09■□□□□ 0.33
POLR1EQ9GZS1 AC010507.1-201ENST00000633895 436 ntBASIC17.09■□□□□ 0.33
POLR1EQ9GZS1 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.09■□□□□ 0.33
POLR1EQ9GZS1 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
POLR1EQ9GZS1 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
POLR1EQ9GZS1 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
POLR1EQ9GZS1 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.09■□□□□ 0.33
POLR1EQ9GZS1 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.09■□□□□ 0.33
POLR1EQ9GZS1 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
POLR1EQ9GZS1 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms