Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 CALY-203ENST00000368558 825 ntTSL 5 BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 TFAMP1-201ENST00000412727 736 ntBASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 AL627223.1-201ENST00000416693 442 ntBASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 AL645939.2-201ENST00000427340 991 ntBASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 GPS2P2-201ENST00000430745 888 ntBASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 AC005237.2-201ENST00000434368 219 ntBASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 AC140658.5-201ENST00000438532 169 ntBASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 AL592309.1-201ENST00000443127 649 ntBASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 MIR4515-201ENST00000584082 81 ntBASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 Z92544.3-201ENST00000624747 417 ntBASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 LINC00628-201ENST00000628516 1289 ntBASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 AC012569.1-201ENST00000591191 1524 ntBASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 NARF-206ENST00000457415 1668 ntTSL 5 BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 AC016027.1-202ENST00000607927 1699 ntBASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
KRTAP4-3Q9BYR4 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms