Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 ARL16-210ENST00000574938 751 ntTSL 2 BASIC17.07■□□□□ 0.32
PHOX2BQ99453 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.07■□□□□ 0.32
PHOX2BQ99453 APOC4-201ENST00000591600 348 ntTSL 3 BASIC17.07■□□□□ 0.32
PHOX2BQ99453 BNIP3P29-201ENST00000598302 571 ntBASIC17.07■□□□□ 0.32
PHOX2BQ99453 AC099568.2-201ENST00000609194 695 ntBASIC17.07■□□□□ 0.32
PHOX2BQ99453 AC011447.5-201ENST00000616168 564 ntBASIC17.07■□□□□ 0.32
PHOX2BQ99453 MIR6775-201ENST00000617557 69 ntBASIC17.07■□□□□ 0.32
PHOX2BQ99453 SPDYE12P-201ENST00000618416 771 ntBASIC17.07■□□□□ 0.32
PHOX2BQ99453 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PHOX2BQ99453 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PHOX2BQ99453 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.07■□□□□ 0.32
PHOX2BQ99453 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PHOX2BQ99453 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PHOX2BQ99453 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PHOX2BQ99453 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PHOX2BQ99453 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PHOX2BQ99453 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PHOX2BQ99453 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PHOX2BQ99453 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PHOX2BQ99453 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
PHOX2BQ99453 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.07■□□□□ 0.32
PHOX2BQ99453 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PHOX2BQ99453 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.07■□□□□ 0.32
PHOX2BQ99453 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PHOX2BQ99453 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.06■□□□□ 0.32
PHOX2BQ99453 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.06■□□□□ 0.32
PHOX2BQ99453 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
PHOX2BQ99453 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.06■□□□□ 0.32
PHOX2BQ99453 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PHOX2BQ99453 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.06■□□□□ 0.32
PHOX2BQ99453 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PHOX2BQ99453 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PHOX2BQ99453 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PHOX2BQ99453 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PHOX2BQ99453 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PHOX2BQ99453 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC17.06■□□□□ 0.32
PHOX2BQ99453 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.06■□□□□ 0.32
PHOX2BQ99453 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC17.06■□□□□ 0.32
PHOX2BQ99453 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC17.06■□□□□ 0.32
PHOX2BQ99453 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC17.06■□□□□ 0.32
PHOX2BQ99453 KRT223P-202ENST00000449164 1292 ntBASIC17.06■□□□□ 0.32
PHOX2BQ99453 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PHOX2BQ99453 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PHOX2BQ99453 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.06■□□□□ 0.32
PHOX2BQ99453 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC17.06■□□□□ 0.32
PHOX2BQ99453 RN7SL219P-201ENST00000582872 296 ntBASIC17.06■□□□□ 0.32
PHOX2BQ99453 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PHOX2BQ99453 AC008738.7-201ENST00000609744 511 ntBASIC17.06■□□□□ 0.32
PHOX2BQ99453 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC17.06■□□□□ 0.32
PHOX2BQ99453 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PHOX2BQ99453 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PHOX2BQ99453 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PHOX2BQ99453 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PHOX2BQ99453 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PHOX2BQ99453 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PHOX2BQ99453 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PHOX2BQ99453 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
PHOX2BQ99453 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.05■□□□□ 0.32
PHOX2BQ99453 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.05■□□□□ 0.32
PHOX2BQ99453 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PHOX2BQ99453 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PHOX2BQ99453 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PHOX2BQ99453 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
PHOX2BQ99453 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.05■□□□□ 0.32
PHOX2BQ99453 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PHOX2BQ99453 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.05■□□□□ 0.32
PHOX2BQ99453 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
PHOX2BQ99453 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PHOX2BQ99453 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PHOX2BQ99453 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PHOX2BQ99453 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PHOX2BQ99453 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PHOX2BQ99453 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.05■□□□□ 0.32
PHOX2BQ99453 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC17.05■□□□□ 0.32
PHOX2BQ99453 RPL28-204ENST00000431533 590 ntTSL 2 BASIC17.05■□□□□ 0.32
PHOX2BQ99453 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PHOX2BQ99453 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC17.05■□□□□ 0.32
PHOX2BQ99453 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PHOX2BQ99453 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.05■□□□□ 0.32
PHOX2BQ99453 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC17.05■□□□□ 0.32
PHOX2BQ99453 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.05■□□□□ 0.32
PHOX2BQ99453 MIR6869-201ENST00000619434 62 ntBASIC17.05■□□□□ 0.32
PHOX2BQ99453 MIR6727-201ENST00000620702 65 ntBASIC17.05■□□□□ 0.32
PHOX2BQ99453 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.05■□□□□ 0.32
PHOX2BQ99453 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PHOX2BQ99453 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PHOX2BQ99453 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PHOX2BQ99453 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.05■□□□□ 0.32
PHOX2BQ99453 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
PHOX2BQ99453 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PHOX2BQ99453 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PHOX2BQ99453 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PHOX2BQ99453 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.05■□□□□ 0.32
PHOX2BQ99453 HTR7P1-202ENST00000624664 4411 ntBASIC17.05■□□□□ 0.32
PHOX2BQ99453 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
PHOX2BQ99453 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PHOX2BQ99453 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.04■□□□□ 0.32
PHOX2BQ99453 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PHOX2BQ99453 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PHOX2BQ99453 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms