Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 HLA-J-202ENST00000469281 1241 ntBASIC17.4■□□□□ 0.38
CSPG4P5Q96PW8 IGHV3-22-201ENST00000520721 359 ntBASIC17.4■□□□□ 0.38
CSPG4P5Q96PW8 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.4■□□□□ 0.38
CSPG4P5Q96PW8 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.4■□□□□ 0.38
CSPG4P5Q96PW8 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSPG4P5Q96PW8 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSPG4P5Q96PW8 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSPG4P5Q96PW8 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSPG4P5Q96PW8 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
CSPG4P5Q96PW8 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CSPG4P5Q96PW8 AC131009.4-201ENST00000624048 1740 ntBASIC17.4■□□□□ 0.38
CSPG4P5Q96PW8 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
CSPG4P5Q96PW8 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSPG4P5Q96PW8 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSPG4P5Q96PW8 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
CSPG4P5Q96PW8 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CSPG4P5Q96PW8 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSPG4P5Q96PW8 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.4■□□□□ 0.38
CSPG4P5Q96PW8 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSPG4P5Q96PW8 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSPG4P5Q96PW8 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CSPG4P5Q96PW8 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CSPG4P5Q96PW8 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
CSPG4P5Q96PW8 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
CSPG4P5Q96PW8 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.39■□□□□ 0.37
CSPG4P5Q96PW8 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CSPG4P5Q96PW8 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CSPG4P5Q96PW8 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CSPG4P5Q96PW8 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CSPG4P5Q96PW8 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CSPG4P5Q96PW8 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CSPG4P5Q96PW8 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CSPG4P5Q96PW8 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CSPG4P5Q96PW8 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.39■□□□□ 0.37
CSPG4P5Q96PW8 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.39■□□□□ 0.37
CSPG4P5Q96PW8 AC009947.1-201ENST00000444350 727 ntBASIC17.39■□□□□ 0.37
CSPG4P5Q96PW8 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.39■□□□□ 0.37
CSPG4P5Q96PW8 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.39■□□□□ 0.37
CSPG4P5Q96PW8 UNC93B6-202ENST00000528242 690 ntBASIC17.39■□□□□ 0.37
CSPG4P5Q96PW8 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.39■□□□□ 0.37
CSPG4P5Q96PW8 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
CSPG4P5Q96PW8 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.39■□□□□ 0.37
CSPG4P5Q96PW8 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.39■□□□□ 0.37
CSPG4P5Q96PW8 AC010654.1-201ENST00000615722 808 ntBASIC17.39■□□□□ 0.37
CSPG4P5Q96PW8 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.39■□□□□ 0.37
CSPG4P5Q96PW8 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CSPG4P5Q96PW8 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CSPG4P5Q96PW8 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CSPG4P5Q96PW8 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CSPG4P5Q96PW8 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CSPG4P5Q96PW8 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CSPG4P5Q96PW8 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CSPG4P5Q96PW8 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.39■□□□□ 0.37
CSPG4P5Q96PW8 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.39■□□□□ 0.37
CSPG4P5Q96PW8 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CSPG4P5Q96PW8 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CSPG4P5Q96PW8 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CSPG4P5Q96PW8 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.38■□□□□ 0.37
CSPG4P5Q96PW8 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSPG4P5Q96PW8 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CSPG4P5Q96PW8 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSPG4P5Q96PW8 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSPG4P5Q96PW8 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
CSPG4P5Q96PW8 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSPG4P5Q96PW8 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.38■□□□□ 0.37
CSPG4P5Q96PW8 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSPG4P5Q96PW8 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSPG4P5Q96PW8 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSPG4P5Q96PW8 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSPG4P5Q96PW8 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSPG4P5Q96PW8 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.38■□□□□ 0.37
CSPG4P5Q96PW8 PRSS29P-201ENST00000440800 595 ntBASIC17.38■□□□□ 0.37
CSPG4P5Q96PW8 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CSPG4P5Q96PW8 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.38■□□□□ 0.37
CSPG4P5Q96PW8 RNA5SP415-201ENST00000517246 115 ntBASIC17.38■□□□□ 0.37
CSPG4P5Q96PW8 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.38■□□□□ 0.37
CSPG4P5Q96PW8 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.38■□□□□ 0.37
CSPG4P5Q96PW8 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
CSPG4P5Q96PW8 AC005412.3-201ENST00000580309 715 ntBASIC17.38■□□□□ 0.37
CSPG4P5Q96PW8 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.38■□□□□ 0.37
CSPG4P5Q96PW8 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.38■□□□□ 0.37
CSPG4P5Q96PW8 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CSPG4P5Q96PW8 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSPG4P5Q96PW8 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CSPG4P5Q96PW8 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.38■□□□□ 0.37
CSPG4P5Q96PW8 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSPG4P5Q96PW8 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CSPG4P5Q96PW8 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.37■□□□□ 0.37
CSPG4P5Q96PW8 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CSPG4P5Q96PW8 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CSPG4P5Q96PW8 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CSPG4P5Q96PW8 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CSPG4P5Q96PW8 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
CSPG4P5Q96PW8 AL671710.1-201ENST00000610245 2349 ntBASIC17.37■□□□□ 0.37
CSPG4P5Q96PW8 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CSPG4P5Q96PW8 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.37■□□□□ 0.37
CSPG4P5Q96PW8 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CSPG4P5Q96PW8 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CSPG4P5Q96PW8 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CSPG4P5Q96PW8 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms