Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS33AQ96AX1 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS33AQ96AX1 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.29■□□□□ 0.2
VPS33AQ96AX1 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
VPS33AQ96AX1 AC009533.2-201ENST00000543664 586 ntBASIC16.29■□□□□ 0.2
VPS33AQ96AX1 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.29■□□□□ 0.2
VPS33AQ96AX1 AP005901.3-202ENST00000581653 237 ntBASIC16.29■□□□□ 0.2
VPS33AQ96AX1 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.29■□□□□ 0.2
VPS33AQ96AX1 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS33AQ96AX1 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.29■□□□□ 0.2
VPS33AQ96AX1 HYMAI-201ENST00000635591 3347 ntBASIC16.29■□□□□ 0.2
VPS33AQ96AX1 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VPS33AQ96AX1 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VPS33AQ96AX1 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VPS33AQ96AX1 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.29■□□□□ 0.2
VPS33AQ96AX1 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
VPS33AQ96AX1 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.29■□□□□ 0.2
VPS33AQ96AX1 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VPS33AQ96AX1 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.29■□□□□ 0.2
VPS33AQ96AX1 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS33AQ96AX1 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS33AQ96AX1 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS33AQ96AX1 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS33AQ96AX1 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS33AQ96AX1 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VPS33AQ96AX1 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VPS33AQ96AX1 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VPS33AQ96AX1 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
VPS33AQ96AX1 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VPS33AQ96AX1 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
VPS33AQ96AX1 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.28■□□□□ 0.2
VPS33AQ96AX1 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VPS33AQ96AX1 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VPS33AQ96AX1 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VPS33AQ96AX1 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.28■□□□□ 0.2
VPS33AQ96AX1 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
VPS33AQ96AX1 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VPS33AQ96AX1 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
VPS33AQ96AX1 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VPS33AQ96AX1 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VPS33AQ96AX1 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VPS33AQ96AX1 TUBB8P12-201ENST00000308911 1335 ntBASIC16.28■□□□□ 0.2
VPS33AQ96AX1 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VPS33AQ96AX1 TUBB7P-202ENST00000428444 1305 ntBASIC16.28■□□□□ 0.2
VPS33AQ96AX1 TUBB8P7-204ENST00000567960 1332 ntBASIC16.28■□□□□ 0.2
VPS33AQ96AX1 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VPS33AQ96AX1 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
VPS33AQ96AX1 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VPS33AQ96AX1 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
VPS33AQ96AX1 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VPS33AQ96AX1 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VPS33AQ96AX1 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VPS33AQ96AX1 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VPS33AQ96AX1 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.28■□□□□ 0.2
VPS33AQ96AX1 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
VPS33AQ96AX1 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VPS33AQ96AX1 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.28■□□□□ 0.2
VPS33AQ96AX1 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.28■□□□□ 0.2
VPS33AQ96AX1 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.28■□□□□ 0.2
VPS33AQ96AX1 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.28■□□□□ 0.2
VPS33AQ96AX1 KRT8P26-201ENST00000534154 1276 ntBASIC16.28■□□□□ 0.2
VPS33AQ96AX1 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.28■□□□□ 0.2
VPS33AQ96AX1 AC011467.2-201ENST00000598425 242 ntBASIC16.28■□□□□ 0.2
VPS33AQ96AX1 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.28■□□□□ 0.2
VPS33AQ96AX1 LINC01023-201ENST00000606054 436 ntBASIC16.28■□□□□ 0.2
VPS33AQ96AX1 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.28■□□□□ 0.2
VPS33AQ96AX1 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
VPS33AQ96AX1 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.28■□□□□ 0.2
VPS33AQ96AX1 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
VPS33AQ96AX1 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
VPS33AQ96AX1 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VPS33AQ96AX1 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.28■□□□□ 0.2
VPS33AQ96AX1 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.28■□□□□ 0.2
VPS33AQ96AX1 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
VPS33AQ96AX1 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VPS33AQ96AX1 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VPS33AQ96AX1 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VPS33AQ96AX1 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
VPS33AQ96AX1 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
VPS33AQ96AX1 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VPS33AQ96AX1 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
VPS33AQ96AX1 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VPS33AQ96AX1 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
VPS33AQ96AX1 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VPS33AQ96AX1 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VPS33AQ96AX1 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VPS33AQ96AX1 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
VPS33AQ96AX1 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.27■□□□□ 0.2
VPS33AQ96AX1 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VPS33AQ96AX1 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
VPS33AQ96AX1 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VPS33AQ96AX1 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.27■□□□□ 0.2
VPS33AQ96AX1 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VPS33AQ96AX1 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VPS33AQ96AX1 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.27■□□□□ 0.2
VPS33AQ96AX1 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VPS33AQ96AX1 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.27■□□□□ 0.2
VPS33AQ96AX1 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VPS33AQ96AX1 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
VPS33AQ96AX1 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms