Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
CASKIN1Q8WXD9 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.73
CASKIN1Q8WXD9 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC25.89■■□□□ 1.73
CASKIN1Q8WXD9 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.73
CASKIN1Q8WXD9 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
CASKIN1Q8WXD9 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC25.89■■□□□ 1.73
CASKIN1Q8WXD9 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
CASKIN1Q8WXD9 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
CASKIN1Q8WXD9 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC25.89■■□□□ 1.73
CASKIN1Q8WXD9 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
CASKIN1Q8WXD9 RNA5SP410-201ENST00000516285 106 ntBASIC25.88■■□□□ 1.73
CASKIN1Q8WXD9 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC25.88■■□□□ 1.73
CASKIN1Q8WXD9 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC25.88■■□□□ 1.73
CASKIN1Q8WXD9 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC25.88■■□□□ 1.73
CASKIN1Q8WXD9 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC25.88■■□□□ 1.73
CASKIN1Q8WXD9 AC009407.1-201ENST00000568958 598 ntBASIC25.88■■□□□ 1.73
CASKIN1Q8WXD9 AC061975.2-201ENST00000581722 295 ntBASIC25.88■■□□□ 1.73
CASKIN1Q8WXD9 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC25.88■■□□□ 1.73
CASKIN1Q8WXD9 RN7SL828P-201ENST00000607615 303 ntBASIC25.88■■□□□ 1.73
CASKIN1Q8WXD9 RAB34-223ENST00000636154 730 ntTSL 2 BASIC25.88■■□□□ 1.73
CASKIN1Q8WXD9 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC25.88■■□□□ 1.73
CASKIN1Q8WXD9 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC25.88■■□□□ 1.73
CASKIN1Q8WXD9 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC25.88■■□□□ 1.73
CASKIN1Q8WXD9 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
CASKIN1Q8WXD9 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC25.88■■□□□ 1.73
CASKIN1Q8WXD9 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC25.88■■□□□ 1.73
CASKIN1Q8WXD9 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CASKIN1Q8WXD9 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
CASKIN1Q8WXD9 AC139713.2-201ENST00000641328 2723 ntBASIC25.88■■□□□ 1.73
CASKIN1Q8WXD9 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC25.88■■□□□ 1.73
CASKIN1Q8WXD9 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
CASKIN1Q8WXD9 CETN4P-206ENST00000642099 2168 ntBASIC25.88■■□□□ 1.73
CASKIN1Q8WXD9 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CASKIN1Q8WXD9 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC25.88■■□□□ 1.73
CASKIN1Q8WXD9 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC25.88■■□□□ 1.73
CASKIN1Q8WXD9 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CASKIN1Q8WXD9 METTL26-204ENST00000397665 558 ntTSL 2 BASIC25.88■■□□□ 1.73
CASKIN1Q8WXD9 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC25.88■■□□□ 1.73
CASKIN1Q8WXD9 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CASKIN1Q8WXD9 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC25.88■■□□□ 1.73
CASKIN1Q8WXD9 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
CASKIN1Q8WXD9 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
CASKIN1Q8WXD9 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CASKIN1Q8WXD9 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CASKIN1Q8WXD9 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CASKIN1Q8WXD9 GPAA1P2-202ENST00000606848 1787 ntBASIC25.87■■□□□ 1.73
CASKIN1Q8WXD9 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC25.87■■□□□ 1.73
CASKIN1Q8WXD9 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
CASKIN1Q8WXD9 AL512638.1-201ENST00000457493 794 ntBASIC25.87■■□□□ 1.73
CASKIN1Q8WXD9 AC004790.1-201ENST00000612686 536 ntBASIC25.87■■□□□ 1.73
CASKIN1Q8WXD9 AC004840.1-201ENST00000636359 365 ntBASIC25.87■■□□□ 1.73
CASKIN1Q8WXD9 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC25.87■■□□□ 1.73
CASKIN1Q8WXD9 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
CASKIN1Q8WXD9 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
CASKIN1Q8WXD9 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CASKIN1Q8WXD9 AC087499.5-201ENST00000452760 1342 ntBASIC25.86■■□□□ 1.73
CASKIN1Q8WXD9 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
CASKIN1Q8WXD9 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
CASKIN1Q8WXD9 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC25.86■■□□□ 1.73
CASKIN1Q8WXD9 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CASKIN1Q8WXD9 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC25.86■■□□□ 1.73
CASKIN1Q8WXD9 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC25.86■■□□□ 1.73
CASKIN1Q8WXD9 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC25.86■■□□□ 1.73
CASKIN1Q8WXD9 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC25.86■■□□□ 1.73
CASKIN1Q8WXD9 BANP-227ENST00000626016 2144 ntTSL 2 BASIC25.86■■□□□ 1.73
CASKIN1Q8WXD9 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CASKIN1Q8WXD9 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CASKIN1Q8WXD9 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
CASKIN1Q8WXD9 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC25.86■■□□□ 1.73
CASKIN1Q8WXD9 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CASKIN1Q8WXD9 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC25.86■■□□□ 1.73
CASKIN1Q8WXD9 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CASKIN1Q8WXD9 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
CASKIN1Q8WXD9 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
CASKIN1Q8WXD9 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC25.86■■□□□ 1.73
CASKIN1Q8WXD9 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC25.86■■□□□ 1.73
CASKIN1Q8WXD9 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
CASKIN1Q8WXD9 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CASKIN1Q8WXD9 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CASKIN1Q8WXD9 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC25.85■■□□□ 1.73
CASKIN1Q8WXD9 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CASKIN1Q8WXD9 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
CASKIN1Q8WXD9 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
CASKIN1Q8WXD9 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC25.85■■□□□ 1.73
CASKIN1Q8WXD9 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CASKIN1Q8WXD9 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC25.85■■□□□ 1.73
CASKIN1Q8WXD9 AMT-206ENST00000458307 1860 ntTSL 2 BASIC25.85■■□□□ 1.73
CASKIN1Q8WXD9 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CASKIN1Q8WXD9 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC25.85■■□□□ 1.73
CASKIN1Q8WXD9 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CASKIN1Q8WXD9 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
CASKIN1Q8WXD9 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CASKIN1Q8WXD9 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CASKIN1Q8WXD9 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC25.85■■□□□ 1.73
CASKIN1Q8WXD9 GSAP-205ENST00000430584 600 ntTSL 5 BASIC25.85■■□□□ 1.73
CASKIN1Q8WXD9 AP005018.1-201ENST00000525475 301 ntBASIC25.85■■□□□ 1.73
CASKIN1Q8WXD9 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC25.85■■□□□ 1.73
CASKIN1Q8WXD9 AL079307.3-201ENST00000556114 283 ntBASIC25.85■■□□□ 1.73
CASKIN1Q8WXD9 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC25.85■■□□□ 1.73
CASKIN1Q8WXD9 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC25.85■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms