Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
U2AF1L4Q8WU68 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
U2AF1L4Q8WU68 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.31■□□□□ 0.68
U2AF1L4Q8WU68 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
U2AF1L4Q8WU68 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC19.31■□□□□ 0.68
U2AF1L4Q8WU68 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
U2AF1L4Q8WU68 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC19.31■□□□□ 0.68
U2AF1L4Q8WU68 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC19.31■□□□□ 0.68
U2AF1L4Q8WU68 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC19.31■□□□□ 0.68
U2AF1L4Q8WU68 AL645728.2-201ENST00000641974 660 ntBASIC19.31■□□□□ 0.68
U2AF1L4Q8WU68 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
U2AF1L4Q8WU68 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
U2AF1L4Q8WU68 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
U2AF1L4Q8WU68 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
U2AF1L4Q8WU68 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
U2AF1L4Q8WU68 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.31■□□□□ 0.68
U2AF1L4Q8WU68 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.3■□□□□ 0.68
U2AF1L4Q8WU68 AC129492.6-201ENST00000611383 1305 ntBASIC19.3■□□□□ 0.68
U2AF1L4Q8WU68 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
U2AF1L4Q8WU68 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
U2AF1L4Q8WU68 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.3■□□□□ 0.68
U2AF1L4Q8WU68 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
U2AF1L4Q8WU68 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
U2AF1L4Q8WU68 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
U2AF1L4Q8WU68 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
U2AF1L4Q8WU68 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
U2AF1L4Q8WU68 ARSEP1-201ENST00000420443 635 ntBASIC19.3■□□□□ 0.68
U2AF1L4Q8WU68 IGHV3-62-201ENST00000520057 340 ntBASIC19.3■□□□□ 0.68
U2AF1L4Q8WU68 INO80E-210ENST00000567705 880 ntTSL 3 BASIC19.3■□□□□ 0.68
U2AF1L4Q8WU68 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.3■□□□□ 0.68
U2AF1L4Q8WU68 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
U2AF1L4Q8WU68 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
U2AF1L4Q8WU68 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
U2AF1L4Q8WU68 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
U2AF1L4Q8WU68 TDG-209ENST00000544861 1387 ntTSL 2 BASIC19.3■□□□□ 0.68
U2AF1L4Q8WU68 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
U2AF1L4Q8WU68 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
U2AF1L4Q8WU68 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.3■□□□□ 0.68
U2AF1L4Q8WU68 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.3■□□□□ 0.68
U2AF1L4Q8WU68 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.3■□□□□ 0.68
U2AF1L4Q8WU68 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
U2AF1L4Q8WU68 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
U2AF1L4Q8WU68 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
U2AF1L4Q8WU68 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
U2AF1L4Q8WU68 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
U2AF1L4Q8WU68 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
U2AF1L4Q8WU68 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
U2AF1L4Q8WU68 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
U2AF1L4Q8WU68 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
U2AF1L4Q8WU68 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
U2AF1L4Q8WU68 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
U2AF1L4Q8WU68 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
U2AF1L4Q8WU68 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
U2AF1L4Q8WU68 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
U2AF1L4Q8WU68 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
U2AF1L4Q8WU68 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
U2AF1L4Q8WU68 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
U2AF1L4Q8WU68 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
U2AF1L4Q8WU68 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.29■□□□□ 0.68
U2AF1L4Q8WU68 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
U2AF1L4Q8WU68 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
U2AF1L4Q8WU68 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
U2AF1L4Q8WU68 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC19.29■□□□□ 0.68
U2AF1L4Q8WU68 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC19.29■□□□□ 0.68
U2AF1L4Q8WU68 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC19.29■□□□□ 0.68
U2AF1L4Q8WU68 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
U2AF1L4Q8WU68 SLC25A6P2-201ENST00000497974 877 ntBASIC19.29■□□□□ 0.68
U2AF1L4Q8WU68 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
U2AF1L4Q8WU68 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC19.29■□□□□ 0.68
U2AF1L4Q8WU68 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC19.29■□□□□ 0.68
U2AF1L4Q8WU68 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC19.29■□□□□ 0.68
U2AF1L4Q8WU68 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
U2AF1L4Q8WU68 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
U2AF1L4Q8WU68 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.29■□□□□ 0.68
U2AF1L4Q8WU68 BX276092.7-203ENST00000637198 1536 ntBASIC19.29■□□□□ 0.68
U2AF1L4Q8WU68 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.29■□□□□ 0.68
U2AF1L4Q8WU68 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
U2AF1L4Q8WU68 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
U2AF1L4Q8WU68 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
U2AF1L4Q8WU68 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
U2AF1L4Q8WU68 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.28■□□□□ 0.68
U2AF1L4Q8WU68 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
U2AF1L4Q8WU68 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
U2AF1L4Q8WU68 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC19.28■□□□□ 0.68
U2AF1L4Q8WU68 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
U2AF1L4Q8WU68 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC19.28■□□□□ 0.68
U2AF1L4Q8WU68 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC19.28■□□□□ 0.68
U2AF1L4Q8WU68 PPP6R2P1-201ENST00000450880 1275 ntBASIC19.28■□□□□ 0.68
U2AF1L4Q8WU68 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
U2AF1L4Q8WU68 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC19.28■□□□□ 0.68
U2AF1L4Q8WU68 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC19.28■□□□□ 0.68
U2AF1L4Q8WU68 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
U2AF1L4Q8WU68 UXT-AS1-201ENST00000590504 1525 ntBASIC19.28■□□□□ 0.68
U2AF1L4Q8WU68 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.28■□□□□ 0.68
U2AF1L4Q8WU68 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
U2AF1L4Q8WU68 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
U2AF1L4Q8WU68 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
U2AF1L4Q8WU68 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
U2AF1L4Q8WU68 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
U2AF1L4Q8WU68 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms