Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ALMS1Q8TCU4 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC11.17□□□□□ -0.62
ALMS1Q8TCU4 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ALMS1Q8TCU4 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ALMS1Q8TCU4 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
ALMS1Q8TCU4 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ALMS1Q8TCU4 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC11.17□□□□□ -0.62
ALMS1Q8TCU4 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC11.17□□□□□ -0.62
ALMS1Q8TCU4 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
ALMS1Q8TCU4 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC11.17□□□□□ -0.62
ALMS1Q8TCU4 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
ALMS1Q8TCU4 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC11.17□□□□□ -0.62
ALMS1Q8TCU4 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC11.17□□□□□ -0.62
ALMS1Q8TCU4 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ALMS1Q8TCU4 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
ALMS1Q8TCU4 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ALMS1Q8TCU4 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
ALMS1Q8TCU4 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
ALMS1Q8TCU4 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
ALMS1Q8TCU4 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ALMS1Q8TCU4 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ALMS1Q8TCU4 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ALMS1Q8TCU4 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
ALMS1Q8TCU4 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC11.17□□□□□ -0.62
ALMS1Q8TCU4 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC11.17□□□□□ -0.62
ALMS1Q8TCU4 AGER-214ENST00000538695 487 ntTSL 2 BASIC11.17□□□□□ -0.62
ALMS1Q8TCU4 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
ALMS1Q8TCU4 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC11.17□□□□□ -0.62
ALMS1Q8TCU4 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
ALMS1Q8TCU4 AMT-232ENST00000636199 1546 ntTSL 5 BASIC11.17□□□□□ -0.62
ALMS1Q8TCU4 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC11.17□□□□□ -0.62
ALMS1Q8TCU4 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ALMS1Q8TCU4 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC11.17□□□□□ -0.62
ALMS1Q8TCU4 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
ALMS1Q8TCU4 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
ALMS1Q8TCU4 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC11.17□□□□□ -0.62
ALMS1Q8TCU4 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC11.17□□□□□ -0.62
ALMS1Q8TCU4 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC11.17□□□□□ -0.62
ALMS1Q8TCU4 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ALMS1Q8TCU4 BRWD1P1-201ENST00000401091 371 ntBASIC11.17□□□□□ -0.62
ALMS1Q8TCU4 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC11.17□□□□□ -0.62
ALMS1Q8TCU4 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC11.17□□□□□ -0.62
ALMS1Q8TCU4 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC11.17□□□□□ -0.62
ALMS1Q8TCU4 PIGL-212ENST00000581006 554 ntTSL 4 BASIC11.17□□□□□ -0.62
ALMS1Q8TCU4 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC11.17□□□□□ -0.62
ALMS1Q8TCU4 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC11.17□□□□□ -0.62
ALMS1Q8TCU4 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC11.16□□□□□ -0.62
ALMS1Q8TCU4 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
ALMS1Q8TCU4 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
ALMS1Q8TCU4 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ALMS1Q8TCU4 STX1A-203ENST00000395155 783 ntTSL 2 BASIC11.16□□□□□ -0.62
ALMS1Q8TCU4 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
ALMS1Q8TCU4 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
ALMS1Q8TCU4 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
ALMS1Q8TCU4 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
ALMS1Q8TCU4 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
ALMS1Q8TCU4 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ALMS1Q8TCU4 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ALMS1Q8TCU4 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
ALMS1Q8TCU4 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ALMS1Q8TCU4 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
ALMS1Q8TCU4 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ALMS1Q8TCU4 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
ALMS1Q8TCU4 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
ALMS1Q8TCU4 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
ALMS1Q8TCU4 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC11.16□□□□□ -0.62
ALMS1Q8TCU4 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC11.16□□□□□ -0.62
ALMS1Q8TCU4 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC11.16□□□□□ -0.62
ALMS1Q8TCU4 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC11.16□□□□□ -0.62
ALMS1Q8TCU4 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
ALMS1Q8TCU4 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC11.16□□□□□ -0.62
ALMS1Q8TCU4 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC11.16□□□□□ -0.62
ALMS1Q8TCU4 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
ALMS1Q8TCU4 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC11.16□□□□□ -0.62
ALMS1Q8TCU4 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
ALMS1Q8TCU4 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ALMS1Q8TCU4 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ALMS1Q8TCU4 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
ALMS1Q8TCU4 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
ALMS1Q8TCU4 ELK2AP-201ENST00000392510 1007 ntBASIC11.16□□□□□ -0.62
ALMS1Q8TCU4 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC11.16□□□□□ -0.62
ALMS1Q8TCU4 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC11.16□□□□□ -0.62
ALMS1Q8TCU4 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC11.16□□□□□ -0.62
ALMS1Q8TCU4 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
ALMS1Q8TCU4 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ALMS1Q8TCU4 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC11.16□□□□□ -0.62
ALMS1Q8TCU4 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ALMS1Q8TCU4 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
ALMS1Q8TCU4 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC11.15□□□□□ -0.62
ALMS1Q8TCU4 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
ALMS1Q8TCU4 KRT8P49-201ENST00000604166 1432 ntBASIC11.15□□□□□ -0.62
ALMS1Q8TCU4 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC11.15□□□□□ -0.62
ALMS1Q8TCU4 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC11.15□□□□□ -0.62
ALMS1Q8TCU4 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC11.15□□□□□ -0.62
ALMS1Q8TCU4 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
ALMS1Q8TCU4 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
ALMS1Q8TCU4 NSL1-201ENST00000366976 722 ntTSL 2 BASIC11.15□□□□□ -0.62
ALMS1Q8TCU4 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
ALMS1Q8TCU4 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
ALMS1Q8TCU4 KRT43P-201ENST00000434019 910 ntBASIC11.15□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms