Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CLDND2Q8NHS1 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CLDND2Q8NHS1 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLDND2Q8NHS1 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CLDND2Q8NHS1 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC14.42□□□□□ -0.1
CLDND2Q8NHS1 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CLDND2Q8NHS1 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDND2Q8NHS1 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC14.41□□□□□ -0.1
CLDND2Q8NHS1 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDND2Q8NHS1 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CLDND2Q8NHS1 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC14.41□□□□□ -0.1
CLDND2Q8NHS1 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CLDND2Q8NHS1 AMT-250ENST00000637682 1823 ntTSL 5 BASIC14.41□□□□□ -0.1
CLDND2Q8NHS1 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDND2Q8NHS1 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CLDND2Q8NHS1 REXO1L11P-201ENST00000620964 1927 ntBASIC14.41□□□□□ -0.1
CLDND2Q8NHS1 AC105020.1-201ENST00000435356 2205 ntBASIC14.41□□□□□ -0.1
CLDND2Q8NHS1 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
CLDND2Q8NHS1 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDND2Q8NHS1 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDND2Q8NHS1 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CLDND2Q8NHS1 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDND2Q8NHS1 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDND2Q8NHS1 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDND2Q8NHS1 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDND2Q8NHS1 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.41□□□□□ -0.1
CLDND2Q8NHS1 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.41□□□□□ -0.1
CLDND2Q8NHS1 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.41□□□□□ -0.1
CLDND2Q8NHS1 ACTG1P4-201ENST00000425123 1122 ntBASIC14.41□□□□□ -0.1
CLDND2Q8NHS1 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDND2Q8NHS1 AC004967.1-201ENST00000453589 447 ntBASIC14.41□□□□□ -0.1
CLDND2Q8NHS1 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.41□□□□□ -0.1
CLDND2Q8NHS1 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CLDND2Q8NHS1 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.41□□□□□ -0.1
CLDND2Q8NHS1 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.41□□□□□ -0.1
CLDND2Q8NHS1 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.41□□□□□ -0.1
CLDND2Q8NHS1 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.41□□□□□ -0.1
CLDND2Q8NHS1 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CLDND2Q8NHS1 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CLDND2Q8NHS1 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDND2Q8NHS1 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CLDND2Q8NHS1 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CLDND2Q8NHS1 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDND2Q8NHS1 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDND2Q8NHS1 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CLDND2Q8NHS1 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.41□□□□□ -0.1
CLDND2Q8NHS1 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDND2Q8NHS1 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDND2Q8NHS1 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
CLDND2Q8NHS1 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CLDND2Q8NHS1 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CLDND2Q8NHS1 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CLDND2Q8NHS1 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDND2Q8NHS1 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CLDND2Q8NHS1 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDND2Q8NHS1 DOC2GP-204ENST00000639052 2548 ntBASIC14.41□□□□□ -0.1
CLDND2Q8NHS1 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC14.41□□□□□ -0.1
CLDND2Q8NHS1 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDND2Q8NHS1 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.41□□□□□ -0.1
CLDND2Q8NHS1 AC046185.3-201ENST00000623228 1824 ntBASIC14.41□□□□□ -0.1
CLDND2Q8NHS1 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
CLDND2Q8NHS1 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CLDND2Q8NHS1 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CLDND2Q8NHS1 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CLDND2Q8NHS1 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
CLDND2Q8NHS1 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CLDND2Q8NHS1 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLDND2Q8NHS1 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLDND2Q8NHS1 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLDND2Q8NHS1 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLDND2Q8NHS1 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLDND2Q8NHS1 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLDND2Q8NHS1 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLDND2Q8NHS1 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLDND2Q8NHS1 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC14.4□□□□□ -0.1
CLDND2Q8NHS1 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLDND2Q8NHS1 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLDND2Q8NHS1 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLDND2Q8NHS1 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.4□□□□□ -0.1
CLDND2Q8NHS1 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLDND2Q8NHS1 ENSA-206ENST00000361631 725 ntTSL 2 BASIC14.4□□□□□ -0.1
CLDND2Q8NHS1 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
CLDND2Q8NHS1 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLDND2Q8NHS1 MCCD1P2-201ENST00000423228 335 ntBASIC14.4□□□□□ -0.1
CLDND2Q8NHS1 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.4□□□□□ -0.1
CLDND2Q8NHS1 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CLDND2Q8NHS1 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLDND2Q8NHS1 AC134684.3-201ENST00000641758 218 ntBASIC14.4□□□□□ -0.1
CLDND2Q8NHS1 AC079781.4-201ENST00000641908 219 ntBASIC14.4□□□□□ -0.1
CLDND2Q8NHS1 AC092865.6-201ENST00000642101 219 ntBASIC14.4□□□□□ -0.1
CLDND2Q8NHS1 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
CLDND2Q8NHS1 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLDND2Q8NHS1 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC14.4□□□□□ -0.1
CLDND2Q8NHS1 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
CLDND2Q8NHS1 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CLDND2Q8NHS1 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLDND2Q8NHS1 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLDND2Q8NHS1 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CLDND2Q8NHS1 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLDND2Q8NHS1 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms