Protein–RNA interactions for Protein: Q8NF99

ZNF397, Zinc finger protein 397, humanhuman

Predicted RBP Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF397Q8NF99 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF397Q8NF99 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.77■□□□□ 0.6
ZNF397Q8NF99 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ZNF397Q8NF99 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
ZNF397Q8NF99 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.77■□□□□ 0.59
ZNF397Q8NF99 AC079328.2-201ENST00000561241 3354 ntBASIC18.76■□□□□ 0.59
ZNF397Q8NF99 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF397Q8NF99 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF397Q8NF99 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF397Q8NF99 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
ZNF397Q8NF99 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
ZNF397Q8NF99 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
ZNF397Q8NF99 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF397Q8NF99 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF397Q8NF99 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF397Q8NF99 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC18.76■□□□□ 0.59
ZNF397Q8NF99 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF397Q8NF99 AL845331.1-201ENST00000424978 1190 ntBASIC18.76■□□□□ 0.59
ZNF397Q8NF99 AC011840.4-201ENST00000578471 627 ntBASIC18.76■□□□□ 0.59
ZNF397Q8NF99 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
ZNF397Q8NF99 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
ZNF397Q8NF99 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
ZNF397Q8NF99 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.76■□□□□ 0.59
ZNF397Q8NF99 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF397Q8NF99 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF397Q8NF99 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
ZNF397Q8NF99 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
ZNF397Q8NF99 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF397Q8NF99 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF397Q8NF99 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC18.76■□□□□ 0.59
ZNF397Q8NF99 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF397Q8NF99 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
ZNF397Q8NF99 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF397Q8NF99 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF397Q8NF99 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF397Q8NF99 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
ZNF397Q8NF99 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF397Q8NF99 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF397Q8NF99 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF397Q8NF99 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.75■□□□□ 0.59
ZNF397Q8NF99 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF397Q8NF99 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
ZNF397Q8NF99 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
ZNF397Q8NF99 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF397Q8NF99 AC246785.2-201ENST00000432512 513 ntBASIC18.75■□□□□ 0.59
ZNF397Q8NF99 AP002383.4-201ENST00000442518 975 ntBASIC18.75■□□□□ 0.59
ZNF397Q8NF99 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.75■□□□□ 0.59
ZNF397Q8NF99 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF397Q8NF99 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.75■□□□□ 0.59
ZNF397Q8NF99 AL138831.2-201ENST00000606564 490 ntBASIC18.75■□□□□ 0.59
ZNF397Q8NF99 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF397Q8NF99 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF397Q8NF99 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF397Q8NF99 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF397Q8NF99 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
ZNF397Q8NF99 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.75■□□□□ 0.59
ZNF397Q8NF99 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF397Q8NF99 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.75■□□□□ 0.59
ZNF397Q8NF99 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF397Q8NF99 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF397Q8NF99 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF397Q8NF99 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF397Q8NF99 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.74■□□□□ 0.59
ZNF397Q8NF99 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF397Q8NF99 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF397Q8NF99 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF397Q8NF99 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC18.74■□□□□ 0.59
ZNF397Q8NF99 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF397Q8NF99 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
ZNF397Q8NF99 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF397Q8NF99 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
ZNF397Q8NF99 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF397Q8NF99 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC18.74■□□□□ 0.59
ZNF397Q8NF99 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF397Q8NF99 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF397Q8NF99 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC18.74■□□□□ 0.59
ZNF397Q8NF99 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
ZNF397Q8NF99 AC092171.3-201ENST00000610122 2651 ntBASIC18.74■□□□□ 0.59
ZNF397Q8NF99 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF397Q8NF99 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
ZNF397Q8NF99 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
ZNF397Q8NF99 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF397Q8NF99 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF397Q8NF99 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF397Q8NF99 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
ZNF397Q8NF99 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF397Q8NF99 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.74■□□□□ 0.59
ZNF397Q8NF99 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.74■□□□□ 0.59
ZNF397Q8NF99 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
ZNF397Q8NF99 DRAXINP1-201ENST00000437611 948 ntBASIC18.74■□□□□ 0.59
ZNF397Q8NF99 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.74■□□□□ 0.59
ZNF397Q8NF99 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF397Q8NF99 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.74■□□□□ 0.59
ZNF397Q8NF99 STK25P1-201ENST00000585406 838 ntBASIC18.74■□□□□ 0.59
ZNF397Q8NF99 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.74■□□□□ 0.59
ZNF397Q8NF99 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.74■□□□□ 0.59
ZNF397Q8NF99 AC069148.1-201ENST00000608741 768 ntBASIC18.74■□□□□ 0.59
ZNF397Q8NF99 NPAP1P7-201ENST00000613027 823 ntBASIC18.74■□□□□ 0.59
ZNF397Q8NF99 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF397Q8NF99 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms