Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT78Q8N1N4 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
KRT78Q8N1N4 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
KRT78Q8N1N4 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.33■□□□□ 0.2
KRT78Q8N1N4 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.33■□□□□ 0.2
KRT78Q8N1N4 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
KRT78Q8N1N4 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT78Q8N1N4 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
KRT78Q8N1N4 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KRT78Q8N1N4 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
KRT78Q8N1N4 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT78Q8N1N4 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KRT78Q8N1N4 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KRT78Q8N1N4 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT78Q8N1N4 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.32■□□□□ 0.2
KRT78Q8N1N4 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.32■□□□□ 0.2
KRT78Q8N1N4 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT78Q8N1N4 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT78Q8N1N4 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT78Q8N1N4 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
KRT78Q8N1N4 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.32■□□□□ 0.2
KRT78Q8N1N4 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.32■□□□□ 0.2
KRT78Q8N1N4 AC087163.2-201ENST00000457299 853 ntBASIC16.32■□□□□ 0.2
KRT78Q8N1N4 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT78Q8N1N4 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.32■□□□□ 0.2
KRT78Q8N1N4 AC093909.1-201ENST00000504731 1122 ntBASIC16.32■□□□□ 0.2
KRT78Q8N1N4 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.32■□□□□ 0.2
KRT78Q8N1N4 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KRT78Q8N1N4 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT78Q8N1N4 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
KRT78Q8N1N4 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.32■□□□□ 0.2
KRT78Q8N1N4 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.32■□□□□ 0.2
KRT78Q8N1N4 PCDHB17P-201ENST00000539533 2393 ntBASIC16.32■□□□□ 0.2
KRT78Q8N1N4 AL662844.1-201ENST00000546340 181 ntBASIC16.32■□□□□ 0.2
KRT78Q8N1N4 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.32■□□□□ 0.2
KRT78Q8N1N4 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
KRT78Q8N1N4 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.32■□□□□ 0.2
KRT78Q8N1N4 FAM215A-202ENST00000632077 792 ntBASIC16.32■□□□□ 0.2
KRT78Q8N1N4 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
KRT78Q8N1N4 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
KRT78Q8N1N4 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
KRT78Q8N1N4 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT78Q8N1N4 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.32■□□□□ 0.2
KRT78Q8N1N4 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT78Q8N1N4 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT78Q8N1N4 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT78Q8N1N4 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT78Q8N1N4 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT78Q8N1N4 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
KRT78Q8N1N4 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT78Q8N1N4 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
KRT78Q8N1N4 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
KRT78Q8N1N4 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
KRT78Q8N1N4 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
KRT78Q8N1N4 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
KRT78Q8N1N4 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT78Q8N1N4 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
KRT78Q8N1N4 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.31■□□□□ 0.2
KRT78Q8N1N4 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT78Q8N1N4 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT78Q8N1N4 TOP3BP1-201ENST00000420768 1380 ntBASIC16.31■□□□□ 0.2
KRT78Q8N1N4 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
KRT78Q8N1N4 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
KRT78Q8N1N4 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
KRT78Q8N1N4 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
KRT78Q8N1N4 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.31■□□□□ 0.2
KRT78Q8N1N4 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.31■□□□□ 0.2
KRT78Q8N1N4 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.31■□□□□ 0.2
KRT78Q8N1N4 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
KRT78Q8N1N4 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
KRT78Q8N1N4 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
KRT78Q8N1N4 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.31■□□□□ 0.2
KRT78Q8N1N4 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.31■□□□□ 0.2
KRT78Q8N1N4 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
KRT78Q8N1N4 AC008667.4-201ENST00000607370 168 ntBASIC16.31■□□□□ 0.2
KRT78Q8N1N4 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.31■□□□□ 0.2
KRT78Q8N1N4 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.31■□□□□ 0.2
KRT78Q8N1N4 AC148477.8-201ENST00000624298 468 ntBASIC16.31■□□□□ 0.2
KRT78Q8N1N4 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.31■□□□□ 0.2
KRT78Q8N1N4 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
KRT78Q8N1N4 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT78Q8N1N4 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT78Q8N1N4 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
KRT78Q8N1N4 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
KRT78Q8N1N4 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT78Q8N1N4 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
KRT78Q8N1N4 AC099398.1-201ENST00000567919 2776 ntBASIC16.31■□□□□ 0.2
KRT78Q8N1N4 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.31■□□□□ 0.2
KRT78Q8N1N4 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.3■□□□□ 0.2
KRT78Q8N1N4 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT78Q8N1N4 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
KRT78Q8N1N4 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.3■□□□□ 0.2
KRT78Q8N1N4 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
KRT78Q8N1N4 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT78Q8N1N4 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.3■□□□□ 0.2
KRT78Q8N1N4 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KRT78Q8N1N4 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KRT78Q8N1N4 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT78Q8N1N4 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT78Q8N1N4 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms