Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC50Q8IVM0 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CCDC50Q8IVM0 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC50Q8IVM0 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC50Q8IVM0 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CCDC50Q8IVM0 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.91■□□□□ 0.46
CCDC50Q8IVM0 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.91■□□□□ 0.46
CCDC50Q8IVM0 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC50Q8IVM0 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.91■□□□□ 0.46
CCDC50Q8IVM0 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.91■□□□□ 0.46
CCDC50Q8IVM0 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC50Q8IVM0 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC50Q8IVM0 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC50Q8IVM0 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CCDC50Q8IVM0 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC50Q8IVM0 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC50Q8IVM0 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.91■□□□□ 0.46
CCDC50Q8IVM0 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC50Q8IVM0 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
CCDC50Q8IVM0 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
CCDC50Q8IVM0 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC50Q8IVM0 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.91■□□□□ 0.46
CCDC50Q8IVM0 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC50Q8IVM0 PMPCAP1-201ENST00000508114 1576 ntBASIC17.91■□□□□ 0.46
CCDC50Q8IVM0 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.91■□□□□ 0.46
CCDC50Q8IVM0 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC50Q8IVM0 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC50Q8IVM0 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC50Q8IVM0 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC50Q8IVM0 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC50Q8IVM0 AC148477.5-201ENST00000625164 1645 ntBASIC17.9■□□□□ 0.46
CCDC50Q8IVM0 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC50Q8IVM0 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC50Q8IVM0 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC50Q8IVM0 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC50Q8IVM0 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC50Q8IVM0 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC50Q8IVM0 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC50Q8IVM0 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC50Q8IVM0 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC50Q8IVM0 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC50Q8IVM0 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC50Q8IVM0 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.9■□□□□ 0.46
CCDC50Q8IVM0 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
CCDC50Q8IVM0 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
CCDC50Q8IVM0 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
CCDC50Q8IVM0 IGHV3-47-201ENST00000425060 335 ntBASIC17.9■□□□□ 0.46
CCDC50Q8IVM0 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC50Q8IVM0 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC50Q8IVM0 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC50Q8IVM0 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC50Q8IVM0 SIGLEC30P-201ENST00000455569 941 ntBASIC17.9■□□□□ 0.46
CCDC50Q8IVM0 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
CCDC50Q8IVM0 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.9■□□□□ 0.46
CCDC50Q8IVM0 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC50Q8IVM0 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
CCDC50Q8IVM0 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC50Q8IVM0 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC50Q8IVM0 AC114341.1-201ENST00000618070 349 ntBASIC17.9■□□□□ 0.46
CCDC50Q8IVM0 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CCDC50Q8IVM0 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC50Q8IVM0 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC50Q8IVM0 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC50Q8IVM0 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC50Q8IVM0 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC50Q8IVM0 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
CCDC50Q8IVM0 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC50Q8IVM0 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
CCDC50Q8IVM0 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
CCDC50Q8IVM0 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC50Q8IVM0 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC50Q8IVM0 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CCDC50Q8IVM0 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
CCDC50Q8IVM0 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CCDC50Q8IVM0 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC17.89■□□□□ 0.46
CCDC50Q8IVM0 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CCDC50Q8IVM0 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC50Q8IVM0 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CCDC50Q8IVM0 AC092850.2-201ENST00000623821 2697 ntBASIC17.89■□□□□ 0.45
CCDC50Q8IVM0 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC50Q8IVM0 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CCDC50Q8IVM0 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.89■□□□□ 0.45
CCDC50Q8IVM0 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC50Q8IVM0 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC50Q8IVM0 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
CCDC50Q8IVM0 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC50Q8IVM0 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CCDC50Q8IVM0 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC50Q8IVM0 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC50Q8IVM0 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC50Q8IVM0 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
CCDC50Q8IVM0 AL020989.1-201ENST00000422979 469 ntBASIC17.89■□□□□ 0.45
CCDC50Q8IVM0 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CCDC50Q8IVM0 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CCDC50Q8IVM0 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC50Q8IVM0 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.89■□□□□ 0.45
CCDC50Q8IVM0 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC50Q8IVM0 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.89■□□□□ 0.45
CCDC50Q8IVM0 AC069148.1-201ENST00000608741 768 ntBASIC17.89■□□□□ 0.45
CCDC50Q8IVM0 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms