Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC15.36■□□□□ 0.05
CROCCP3Q8IVE0 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CROCCP3Q8IVE0 MIR4674-201ENST00000582457 87 ntBASIC15.36■□□□□ 0.05
CROCCP3Q8IVE0 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CROCCP3Q8IVE0 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
CROCCP3Q8IVE0 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CROCCP3Q8IVE0 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CROCCP3Q8IVE0 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CROCCP3Q8IVE0 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CROCCP3Q8IVE0 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.36■□□□□ 0.05
CROCCP3Q8IVE0 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CROCCP3Q8IVE0 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CROCCP3Q8IVE0 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.36■□□□□ 0.05
CROCCP3Q8IVE0 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
CROCCP3Q8IVE0 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.36■□□□□ 0.05
CROCCP3Q8IVE0 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CROCCP3Q8IVE0 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
CROCCP3Q8IVE0 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CROCCP3Q8IVE0 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CROCCP3Q8IVE0 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CROCCP3Q8IVE0 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CROCCP3Q8IVE0 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CROCCP3Q8IVE0 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CROCCP3Q8IVE0 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CROCCP3Q8IVE0 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
CROCCP3Q8IVE0 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
CROCCP3Q8IVE0 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CROCCP3Q8IVE0 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CROCCP3Q8IVE0 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.35■□□□□ 0.05
CROCCP3Q8IVE0 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CROCCP3Q8IVE0 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.35■□□□□ 0.05
CROCCP3Q8IVE0 AP005117.1-202ENST00000581724 1908 ntBASIC15.35■□□□□ 0.05
CROCCP3Q8IVE0 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CROCCP3Q8IVE0 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CROCCP3Q8IVE0 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.35■□□□□ 0.05
CROCCP3Q8IVE0 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CROCCP3Q8IVE0 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC15.35■□□□□ 0.05
CROCCP3Q8IVE0 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CROCCP3Q8IVE0 ISG20-202ENST00000379224 540 ntTSL 3 BASIC15.35■□□□□ 0.05
CROCCP3Q8IVE0 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CROCCP3Q8IVE0 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CROCCP3Q8IVE0 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CROCCP3Q8IVE0 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CROCCP3Q8IVE0 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CROCCP3Q8IVE0 GRAMD4P1-201ENST00000435181 1110 ntBASIC15.35■□□□□ 0.05
CROCCP3Q8IVE0 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CROCCP3Q8IVE0 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CROCCP3Q8IVE0 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CROCCP3Q8IVE0 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CROCCP3Q8IVE0 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CROCCP3Q8IVE0 AC233263.1-201ENST00000578059 224 ntBASIC15.35■□□□□ 0.05
CROCCP3Q8IVE0 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CROCCP3Q8IVE0 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC15.35■□□□□ 0.05
CROCCP3Q8IVE0 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CROCCP3Q8IVE0 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.35■□□□□ 0.05
CROCCP3Q8IVE0 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CROCCP3Q8IVE0 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CROCCP3Q8IVE0 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.35■□□□□ 0.05
CROCCP3Q8IVE0 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.35■□□□□ 0.05
CROCCP3Q8IVE0 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
CROCCP3Q8IVE0 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CROCCP3Q8IVE0 AL391807.1-203ENST00000604392 2365 ntBASIC15.35■□□□□ 0.05
CROCCP3Q8IVE0 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CROCCP3Q8IVE0 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CROCCP3Q8IVE0 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CROCCP3Q8IVE0 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CROCCP3Q8IVE0 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CROCCP3Q8IVE0 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CROCCP3Q8IVE0 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CROCCP3Q8IVE0 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
CROCCP3Q8IVE0 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CROCCP3Q8IVE0 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CROCCP3Q8IVE0 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CROCCP3Q8IVE0 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CROCCP3Q8IVE0 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CROCCP3Q8IVE0 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CROCCP3Q8IVE0 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC15.34■□□□□ 0.05
CROCCP3Q8IVE0 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CROCCP3Q8IVE0 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CROCCP3Q8IVE0 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CROCCP3Q8IVE0 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.34■□□□□ 0.05
CROCCP3Q8IVE0 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.34■□□□□ 0.05
CROCCP3Q8IVE0 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CROCCP3Q8IVE0 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
CROCCP3Q8IVE0 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.34■□□□□ 0.05
CROCCP3Q8IVE0 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CROCCP3Q8IVE0 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
CROCCP3Q8IVE0 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CROCCP3Q8IVE0 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
CROCCP3Q8IVE0 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC15.34■□□□□ 0.05
CROCCP3Q8IVE0 MESTP1-201ENST00000404287 994 ntBASIC15.34■□□□□ 0.05
CROCCP3Q8IVE0 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC15.34■□□□□ 0.05
CROCCP3Q8IVE0 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CROCCP3Q8IVE0 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC15.34■□□□□ 0.05
CROCCP3Q8IVE0 SLC25A1P4-201ENST00000567977 778 ntBASIC15.34■□□□□ 0.05
CROCCP3Q8IVE0 CYGB-204ENST00000589342 815 ntTSL 3 BASIC15.34■□□□□ 0.05
CROCCP3Q8IVE0 AC010240.3-201ENST00000607688 395 ntBASIC15.34■□□□□ 0.05
CROCCP3Q8IVE0 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CROCCP3Q8IVE0 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.34■□□□□ 0.05
CROCCP3Q8IVE0 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms