Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRRC28Q86X40 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRRC28Q86X40 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.09■□□□□ 0.01
LRRC28Q86X40 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LRRC28Q86X40 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRRC28Q86X40 AC068418.2-201ENST00000577309 3703 ntBASIC15.09■□□□□ 0.01
LRRC28Q86X40 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.09■□□□□ 0.01
LRRC28Q86X40 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRRC28Q86X40 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.09■□□□□ 0.01
LRRC28Q86X40 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
LRRC28Q86X40 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
LRRC28Q86X40 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC15.09■□□□□ 0.01
LRRC28Q86X40 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LRRC28Q86X40 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LRRC28Q86X40 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRRC28Q86X40 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
LRRC28Q86X40 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LRRC28Q86X40 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRRC28Q86X40 KRT17P6-201ENST00000453795 1220 ntBASIC15.09■□□□□ 0.01
LRRC28Q86X40 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15.09■□□□□ 0.01
LRRC28Q86X40 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRRC28Q86X40 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.09■□□□□ 0.01
LRRC28Q86X40 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.09■□□□□ 0.01
LRRC28Q86X40 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LRRC28Q86X40 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC15.09■□□□□ 0.01
LRRC28Q86X40 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.09■□□□□ 0.01
LRRC28Q86X40 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
LRRC28Q86X40 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC15.09■□□□□ 0.01
LRRC28Q86X40 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LRRC28Q86X40 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.09■□□□□ 0.01
LRRC28Q86X40 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.09■□□□□ 0.01
LRRC28Q86X40 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
LRRC28Q86X40 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.09■□□□□ 0.01
LRRC28Q86X40 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.09■□□□□ 0.01
LRRC28Q86X40 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRRC28Q86X40 AC005052.1-201ENST00000625181 2492 ntBASIC15.09■□□□□ 0.01
LRRC28Q86X40 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LRRC28Q86X40 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
LRRC28Q86X40 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRRC28Q86X40 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.09■□□□□ 0.01
LRRC28Q86X40 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRRC28Q86X40 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRRC28Q86X40 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC15.09■□□□□ 0.01
LRRC28Q86X40 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.09■□□□□ 0.01
LRRC28Q86X40 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.09■□□□□ 0.01
LRRC28Q86X40 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
LRRC28Q86X40 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.08■□□□□ 0.01
LRRC28Q86X40 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
LRRC28Q86X40 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.08■□□□□ 0.01
LRRC28Q86X40 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
LRRC28Q86X40 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0.01
LRRC28Q86X40 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.08■□□□□ 0.01
LRRC28Q86X40 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.08■□□□□ 0.01
LRRC28Q86X40 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.08■□□□□ 0.01
LRRC28Q86X40 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LRRC28Q86X40 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
LRRC28Q86X40 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LRRC28Q86X40 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
LRRC28Q86X40 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.08■□□□□ 0
LRRC28Q86X40 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.08■□□□□ 0
LRRC28Q86X40 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.08■□□□□ 0
LRRC28Q86X40 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.08■□□□□ 0
LRRC28Q86X40 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.08■□□□□ 0
LRRC28Q86X40 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LRRC28Q86X40 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LRRC28Q86X40 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC15.08■□□□□ 0
LRRC28Q86X40 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.08■□□□□ 0
LRRC28Q86X40 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LRRC28Q86X40 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
LRRC28Q86X40 AL845331.1-201ENST00000424978 1190 ntBASIC15.08■□□□□ 0
LRRC28Q86X40 IGHV3-47-201ENST00000425060 335 ntBASIC15.08■□□□□ 0
LRRC28Q86X40 MTCL1P1-201ENST00000446207 792 ntBASIC15.08■□□□□ 0
LRRC28Q86X40 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
LRRC28Q86X40 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.08■□□□□ 0
LRRC28Q86X40 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.08■□□□□ 0
LRRC28Q86X40 AC074051.2-201ENST00000565115 352 ntBASIC15.08■□□□□ 0
LRRC28Q86X40 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.08■□□□□ 0
LRRC28Q86X40 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
LRRC28Q86X40 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.08■□□□□ 0
LRRC28Q86X40 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LRRC28Q86X40 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LRRC28Q86X40 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
LRRC28Q86X40 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
LRRC28Q86X40 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LRRC28Q86X40 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LRRC28Q86X40 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LRRC28Q86X40 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.08■□□□□ 0
LRRC28Q86X40 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LRRC28Q86X40 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.08■□□□□ 0
LRRC28Q86X40 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.08■□□□□ 0
LRRC28Q86X40 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
LRRC28Q86X40 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LRRC28Q86X40 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.08■□□□□ 0
LRRC28Q86X40 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.08■□□□□ 0
LRRC28Q86X40 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LRRC28Q86X40 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.08■□□□□ 0
LRRC28Q86X40 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
LRRC28Q86X40 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.07■□□□□ 0
LRRC28Q86X40 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.07■□□□□ 0
LRRC28Q86X40 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms