Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
FOXR1Q6PIV2 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXR1Q6PIV2 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXR1Q6PIV2 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
FOXR1Q6PIV2 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
FOXR1Q6PIV2 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXR1Q6PIV2 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXR1Q6PIV2 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
FOXR1Q6PIV2 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
FOXR1Q6PIV2 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
FOXR1Q6PIV2 AC233702.3-201ENST00000578656 1387 ntBASIC17.68■□□□□ 0.42
FOXR1Q6PIV2 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FOXR1Q6PIV2 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
FOXR1Q6PIV2 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
FOXR1Q6PIV2 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FOXR1Q6PIV2 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FOXR1Q6PIV2 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
FOXR1Q6PIV2 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
FOXR1Q6PIV2 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FOXR1Q6PIV2 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FOXR1Q6PIV2 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FOXR1Q6PIV2 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.68■□□□□ 0.42
FOXR1Q6PIV2 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.68■□□□□ 0.42
FOXR1Q6PIV2 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.68■□□□□ 0.42
FOXR1Q6PIV2 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
FOXR1Q6PIV2 KRT8P7-201ENST00000533003 1432 ntBASIC17.68■□□□□ 0.42
FOXR1Q6PIV2 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.68■□□□□ 0.42
FOXR1Q6PIV2 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.68■□□□□ 0.42
FOXR1Q6PIV2 KRT8P50-201ENST00000562022 1438 ntBASIC17.68■□□□□ 0.42
FOXR1Q6PIV2 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FOXR1Q6PIV2 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.68■□□□□ 0.42
FOXR1Q6PIV2 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
FOXR1Q6PIV2 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.68■□□□□ 0.42
FOXR1Q6PIV2 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.68■□□□□ 0.42
FOXR1Q6PIV2 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FOXR1Q6PIV2 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC17.68■□□□□ 0.42
FOXR1Q6PIV2 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
FOXR1Q6PIV2 AC092053.1-201ENST00000605787 1936 ntBASIC17.68■□□□□ 0.42
FOXR1Q6PIV2 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
FOXR1Q6PIV2 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
FOXR1Q6PIV2 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
FOXR1Q6PIV2 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FOXR1Q6PIV2 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FOXR1Q6PIV2 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC17.68■□□□□ 0.42
FOXR1Q6PIV2 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FOXR1Q6PIV2 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
FOXR1Q6PIV2 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
FOXR1Q6PIV2 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FOXR1Q6PIV2 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FOXR1Q6PIV2 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
FOXR1Q6PIV2 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
FOXR1Q6PIV2 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FOXR1Q6PIV2 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
FOXR1Q6PIV2 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
FOXR1Q6PIV2 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FOXR1Q6PIV2 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
FOXR1Q6PIV2 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC17.67■□□□□ 0.42
FOXR1Q6PIV2 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.67■□□□□ 0.42
FOXR1Q6PIV2 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
FOXR1Q6PIV2 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FOXR1Q6PIV2 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
FOXR1Q6PIV2 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
FOXR1Q6PIV2 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FOXR1Q6PIV2 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
FOXR1Q6PIV2 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.67■□□□□ 0.42
FOXR1Q6PIV2 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.67■□□□□ 0.42
FOXR1Q6PIV2 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
FOXR1Q6PIV2 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
FOXR1Q6PIV2 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FOXR1Q6PIV2 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
FOXR1Q6PIV2 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.67■□□□□ 0.42
FOXR1Q6PIV2 NUS1P2-201ENST00000417358 873 ntBASIC17.67■□□□□ 0.42
FOXR1Q6PIV2 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.67■□□□□ 0.42
FOXR1Q6PIV2 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
FOXR1Q6PIV2 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.67■□□□□ 0.42
FOXR1Q6PIV2 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.67■□□□□ 0.42
FOXR1Q6PIV2 AP002469.2-201ENST00000531724 424 ntBASIC17.67■□□□□ 0.42
FOXR1Q6PIV2 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.67■□□□□ 0.42
FOXR1Q6PIV2 GPR32P1-201ENST00000601788 811 ntBASIC17.67■□□□□ 0.42
FOXR1Q6PIV2 AL390719.2-201ENST00000606993 987 ntBASIC17.67■□□□□ 0.42
FOXR1Q6PIV2 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
FOXR1Q6PIV2 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC17.67■□□□□ 0.42
FOXR1Q6PIV2 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
FOXR1Q6PIV2 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FOXR1Q6PIV2 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC17.67■□□□□ 0.42
FOXR1Q6PIV2 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FOXR1Q6PIV2 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FOXR1Q6PIV2 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FOXR1Q6PIV2 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
FOXR1Q6PIV2 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.66■□□□□ 0.42
FOXR1Q6PIV2 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FOXR1Q6PIV2 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
FOXR1Q6PIV2 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FOXR1Q6PIV2 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
FOXR1Q6PIV2 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FOXR1Q6PIV2 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FOXR1Q6PIV2 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FOXR1Q6PIV2 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.66■□□□□ 0.42
FOXR1Q6PIV2 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
FOXR1Q6PIV2 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms