Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC15.96■□□□□ 0.15
LPCAT4Q643R3 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC15.96■□□□□ 0.15
LPCAT4Q643R3 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LPCAT4Q643R3 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LPCAT4Q643R3 USF2-205ENST00000594064 1179 ntTSL 2 BASIC15.96■□□□□ 0.15
LPCAT4Q643R3 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LPCAT4Q643R3 GRAMD4P8-201ENST00000605465 1115 ntBASIC15.96■□□□□ 0.15
LPCAT4Q643R3 CD177P1-201ENST00000606252 935 ntBASIC15.96■□□□□ 0.15
LPCAT4Q643R3 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC15.96■□□□□ 0.15
LPCAT4Q643R3 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
LPCAT4Q643R3 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
LPCAT4Q643R3 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LPCAT4Q643R3 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LPCAT4Q643R3 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.96■□□□□ 0.15
LPCAT4Q643R3 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
LPCAT4Q643R3 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.96■□□□□ 0.15
LPCAT4Q643R3 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
LPCAT4Q643R3 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.14
LPCAT4Q643R3 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.14
LPCAT4Q643R3 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.96■□□□□ 0.14
LPCAT4Q643R3 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.14
LPCAT4Q643R3 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LPCAT4Q643R3 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
LPCAT4Q643R3 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LPCAT4Q643R3 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LPCAT4Q643R3 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
LPCAT4Q643R3 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
LPCAT4Q643R3 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LPCAT4Q643R3 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
LPCAT4Q643R3 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LPCAT4Q643R3 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.95■□□□□ 0.14
LPCAT4Q643R3 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
LPCAT4Q643R3 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LPCAT4Q643R3 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LPCAT4Q643R3 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LPCAT4Q643R3 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.95■□□□□ 0.14
LPCAT4Q643R3 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LPCAT4Q643R3 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
LPCAT4Q643R3 MYCLP1-201ENST00000372451 1075 ntBASIC15.95■□□□□ 0.14
LPCAT4Q643R3 SLC25A1P2-201ENST00000430693 912 ntBASIC15.95■□□□□ 0.14
LPCAT4Q643R3 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC15.95■□□□□ 0.14
LPCAT4Q643R3 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LPCAT4Q643R3 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC15.95■□□□□ 0.14
LPCAT4Q643R3 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.95■□□□□ 0.14
LPCAT4Q643R3 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.95■□□□□ 0.14
LPCAT4Q643R3 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.95■□□□□ 0.14
LPCAT4Q643R3 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LPCAT4Q643R3 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.95■□□□□ 0.14
LPCAT4Q643R3 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LPCAT4Q643R3 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LPCAT4Q643R3 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.95■□□□□ 0.14
LPCAT4Q643R3 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
LPCAT4Q643R3 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LPCAT4Q643R3 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
LPCAT4Q643R3 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
LPCAT4Q643R3 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LPCAT4Q643R3 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LPCAT4Q643R3 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LPCAT4Q643R3 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LPCAT4Q643R3 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LPCAT4Q643R3 AL135905.2-201ENST00000584934 1404 ntBASIC15.94■□□□□ 0.14
LPCAT4Q643R3 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
LPCAT4Q643R3 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
LPCAT4Q643R3 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.94■□□□□ 0.14
LPCAT4Q643R3 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LPCAT4Q643R3 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LPCAT4Q643R3 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.94■□□□□ 0.14
LPCAT4Q643R3 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
LPCAT4Q643R3 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LPCAT4Q643R3 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.94■□□□□ 0.14
LPCAT4Q643R3 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.94■□□□□ 0.14
LPCAT4Q643R3 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LPCAT4Q643R3 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
LPCAT4Q643R3 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LPCAT4Q643R3 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LPCAT4Q643R3 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LPCAT4Q643R3 AC096633.1-201ENST00000422446 749 ntBASIC15.94■□□□□ 0.14
LPCAT4Q643R3 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
LPCAT4Q643R3 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC15.94■□□□□ 0.14
LPCAT4Q643R3 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC15.94■□□□□ 0.14
LPCAT4Q643R3 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
LPCAT4Q643R3 MIR4651-201ENST00000582622 73 ntBASIC15.94■□□□□ 0.14
LPCAT4Q643R3 AL157888.1-201ENST00000631930 593 ntBASIC15.94■□□□□ 0.14
LPCAT4Q643R3 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LPCAT4Q643R3 GPR89P-201ENST00000407924 1495 ntBASIC15.94■□□□□ 0.14
LPCAT4Q643R3 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LPCAT4Q643R3 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LPCAT4Q643R3 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
LPCAT4Q643R3 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
LPCAT4Q643R3 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
LPCAT4Q643R3 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LPCAT4Q643R3 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
LPCAT4Q643R3 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LPCAT4Q643R3 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LPCAT4Q643R3 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.94■□□□□ 0.14
LPCAT4Q643R3 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LPCAT4Q643R3 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.94■□□□□ 0.14
LPCAT4Q643R3 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LPCAT4Q643R3 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LPCAT4Q643R3 TUBB8P12-201ENST00000308911 1335 ntBASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms