Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATP6AP1LQ52LC2 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ATP6AP1LQ52LC2 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATP6AP1LQ52LC2 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.37■□□□□ 0.21
ATP6AP1LQ52LC2 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATP6AP1LQ52LC2 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.37■□□□□ 0.21
ATP6AP1LQ52LC2 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ATP6AP1LQ52LC2 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
ATP6AP1LQ52LC2 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
ATP6AP1LQ52LC2 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.37■□□□□ 0.21
ATP6AP1LQ52LC2 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATP6AP1LQ52LC2 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
ATP6AP1LQ52LC2 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.37■□□□□ 0.21
ATP6AP1LQ52LC2 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATP6AP1LQ52LC2 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
ATP6AP1LQ52LC2 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATP6AP1LQ52LC2 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ATP6AP1LQ52LC2 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATP6AP1LQ52LC2 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATP6AP1LQ52LC2 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.37■□□□□ 0.21
ATP6AP1LQ52LC2 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ATP6AP1LQ52LC2 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ATP6AP1LQ52LC2 IER3-202ENST00000376377 1350 ntBASIC16.37■□□□□ 0.21
ATP6AP1LQ52LC2 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATP6AP1LQ52LC2 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
ATP6AP1LQ52LC2 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
ATP6AP1LQ52LC2 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.37■□□□□ 0.21
ATP6AP1LQ52LC2 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ATP6AP1LQ52LC2 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
ATP6AP1LQ52LC2 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.36■□□□□ 0.21
ATP6AP1LQ52LC2 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
ATP6AP1LQ52LC2 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
ATP6AP1LQ52LC2 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.36■□□□□ 0.21
ATP6AP1LQ52LC2 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
ATP6AP1LQ52LC2 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ATP6AP1LQ52LC2 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.36■□□□□ 0.21
ATP6AP1LQ52LC2 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
ATP6AP1LQ52LC2 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
ATP6AP1LQ52LC2 AL391005.1-201ENST00000623953 2435 ntBASIC16.36■□□□□ 0.21
ATP6AP1LQ52LC2 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ATP6AP1LQ52LC2 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.36■□□□□ 0.21
ATP6AP1LQ52LC2 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.36■□□□□ 0.21
ATP6AP1LQ52LC2 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ATP6AP1LQ52LC2 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ATP6AP1LQ52LC2 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ATP6AP1LQ52LC2 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ATP6AP1LQ52LC2 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ATP6AP1LQ52LC2 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
ATP6AP1LQ52LC2 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ATP6AP1LQ52LC2 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ATP6AP1LQ52LC2 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ATP6AP1LQ52LC2 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ATP6AP1LQ52LC2 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.36■□□□□ 0.21
ATP6AP1LQ52LC2 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.36■□□□□ 0.21
ATP6AP1LQ52LC2 AC104819.1-201ENST00000504587 486 ntBASIC16.36■□□□□ 0.21
ATP6AP1LQ52LC2 DUX4L17-201ENST00000557360 1267 ntBASIC16.36■□□□□ 0.21
ATP6AP1LQ52LC2 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.36■□□□□ 0.21
ATP6AP1LQ52LC2 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.36■□□□□ 0.21
ATP6AP1LQ52LC2 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
ATP6AP1LQ52LC2 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.36■□□□□ 0.21
ATP6AP1LQ52LC2 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.36■□□□□ 0.21
ATP6AP1LQ52LC2 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.36■□□□□ 0.21
ATP6AP1LQ52LC2 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.36■□□□□ 0.21
ATP6AP1LQ52LC2 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.36■□□□□ 0.21
ATP6AP1LQ52LC2 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ATP6AP1LQ52LC2 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.36■□□□□ 0.21
ATP6AP1LQ52LC2 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.36■□□□□ 0.21
ATP6AP1LQ52LC2 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
ATP6AP1LQ52LC2 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ATP6AP1LQ52LC2 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ATP6AP1LQ52LC2 LINC02199-201ENST00000506655 2702 ntBASIC16.36■□□□□ 0.21
ATP6AP1LQ52LC2 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ATP6AP1LQ52LC2 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ATP6AP1LQ52LC2 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.36■□□□□ 0.21
ATP6AP1LQ52LC2 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ATP6AP1LQ52LC2 AC004817.3-201ENST00000602957 2129 ntBASIC16.36■□□□□ 0.21
ATP6AP1LQ52LC2 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ATP6AP1LQ52LC2 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ATP6AP1LQ52LC2 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
ATP6AP1LQ52LC2 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ATP6AP1LQ52LC2 AL139384.1-201ENST00000612143 3047 ntBASIC16.35■□□□□ 0.21
ATP6AP1LQ52LC2 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ATP6AP1LQ52LC2 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.35■□□□□ 0.21
ATP6AP1LQ52LC2 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ATP6AP1LQ52LC2 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.35■□□□□ 0.21
ATP6AP1LQ52LC2 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ATP6AP1LQ52LC2 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ATP6AP1LQ52LC2 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.35■□□□□ 0.21
ATP6AP1LQ52LC2 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
ATP6AP1LQ52LC2 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
ATP6AP1LQ52LC2 LINC00895-201ENST00000629028 1637 ntBASIC16.35■□□□□ 0.21
ATP6AP1LQ52LC2 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ATP6AP1LQ52LC2 AP002414.1-201ENST00000391405 1147 ntBASIC16.35■□□□□ 0.21
ATP6AP1LQ52LC2 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ATP6AP1LQ52LC2 LINC00982-205ENST00000420957 435 ntBASIC16.35■□□□□ 0.21
ATP6AP1LQ52LC2 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.35■□□□□ 0.21
ATP6AP1LQ52LC2 ABCD1P5-201ENST00000445663 754 ntBASIC16.35■□□□□ 0.21
ATP6AP1LQ52LC2 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
ATP6AP1LQ52LC2 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.35■□□□□ 0.21
ATP6AP1LQ52LC2 AC087388.1-201ENST00000571370 1112 ntBASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms