Protein–RNA interactions for Protein: Q08554

DSC1, Desmocollin-1, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DSC1Q08554 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.82■□□□□ 0.44
DSC1Q08554 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
DSC1Q08554 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DSC1Q08554 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
DSC1Q08554 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DSC1Q08554 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
DSC1Q08554 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.82■□□□□ 0.44
DSC1Q08554 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
DSC1Q08554 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.82■□□□□ 0.44
DSC1Q08554 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
DSC1Q08554 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
DSC1Q08554 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
DSC1Q08554 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.81■□□□□ 0.44
DSC1Q08554 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
DSC1Q08554 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.81■□□□□ 0.44
DSC1Q08554 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
DSC1Q08554 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
DSC1Q08554 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.81■□□□□ 0.44
DSC1Q08554 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DSC1Q08554 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.81■□□□□ 0.44
DSC1Q08554 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
DSC1Q08554 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
DSC1Q08554 MIR661-201ENST00000384842 89 ntBASIC17.81■□□□□ 0.44
DSC1Q08554 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.81■□□□□ 0.44
DSC1Q08554 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.81■□□□□ 0.44
DSC1Q08554 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.81■□□□□ 0.44
DSC1Q08554 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.81■□□□□ 0.44
DSC1Q08554 UGT1A2P-201ENST00000454886 866 ntBASIC17.81■□□□□ 0.44
DSC1Q08554 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
DSC1Q08554 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.81■□□□□ 0.44
DSC1Q08554 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.81■□□□□ 0.44
DSC1Q08554 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
DSC1Q08554 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.81■□□□□ 0.44
DSC1Q08554 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.81■□□□□ 0.44
DSC1Q08554 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DSC1Q08554 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DSC1Q08554 AC073439.1-201ENST00000624121 1774 ntBASIC17.81■□□□□ 0.44
DSC1Q08554 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.81■□□□□ 0.44
DSC1Q08554 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.8■□□□□ 0.44
DSC1Q08554 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
DSC1Q08554 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DSC1Q08554 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DSC1Q08554 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
DSC1Q08554 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.8■□□□□ 0.44
DSC1Q08554 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DSC1Q08554 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
DSC1Q08554 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
DSC1Q08554 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
DSC1Q08554 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DSC1Q08554 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DSC1Q08554 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.8■□□□□ 0.44
DSC1Q08554 COX20P2-201ENST00000452636 358 ntBASIC17.8■□□□□ 0.44
DSC1Q08554 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.8■□□□□ 0.44
DSC1Q08554 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.8■□□□□ 0.44
DSC1Q08554 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.8■□□□□ 0.44
DSC1Q08554 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC17.8■□□□□ 0.44
DSC1Q08554 AC007967.4-201ENST00000614700 386 ntBASIC17.8■□□□□ 0.44
DSC1Q08554 AL139011.1-202ENST00000642063 584 ntBASIC17.8■□□□□ 0.44
DSC1Q08554 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
DSC1Q08554 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DSC1Q08554 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
DSC1Q08554 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
DSC1Q08554 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
DSC1Q08554 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DSC1Q08554 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
DSC1Q08554 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
DSC1Q08554 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
DSC1Q08554 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.8■□□□□ 0.44
DSC1Q08554 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.8■□□□□ 0.44
DSC1Q08554 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
DSC1Q08554 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
DSC1Q08554 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DSC1Q08554 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.8■□□□□ 0.44
DSC1Q08554 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DSC1Q08554 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
DSC1Q08554 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC17.79■□□□□ 0.44
DSC1Q08554 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DSC1Q08554 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DSC1Q08554 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.79■□□□□ 0.44
DSC1Q08554 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.79■□□□□ 0.44
DSC1Q08554 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DSC1Q08554 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
DSC1Q08554 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
DSC1Q08554 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
DSC1Q08554 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
DSC1Q08554 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.79■□□□□ 0.44
DSC1Q08554 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
DSC1Q08554 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DSC1Q08554 IGHV3-42-201ENST00000520410 361 ntBASIC17.79■□□□□ 0.44
DSC1Q08554 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.79■□□□□ 0.44
DSC1Q08554 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.79■□□□□ 0.44
DSC1Q08554 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
DSC1Q08554 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.79■□□□□ 0.44
DSC1Q08554 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.79■□□□□ 0.44
DSC1Q08554 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.79■□□□□ 0.44
DSC1Q08554 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.79■□□□□ 0.44
DSC1Q08554 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DSC1Q08554 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DSC1Q08554 AL023806.1-201ENST00000603994 1649 ntBASIC17.79■□□□□ 0.44
DSC1Q08554 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms