Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDKL1Q00532 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.66■□□□□ 0.26
CDKL1Q00532 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CDKL1Q00532 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDKL1Q00532 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDKL1Q00532 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDKL1Q00532 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDKL1Q00532 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.66■□□□□ 0.26
CDKL1Q00532 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDKL1Q00532 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDKL1Q00532 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.66■□□□□ 0.26
CDKL1Q00532 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.66■□□□□ 0.26
CDKL1Q00532 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDKL1Q00532 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDKL1Q00532 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDKL1Q00532 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDKL1Q00532 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDKL1Q00532 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDKL1Q00532 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.66■□□□□ 0.26
CDKL1Q00532 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.66■□□□□ 0.26
CDKL1Q00532 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDKL1Q00532 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.66■□□□□ 0.26
CDKL1Q00532 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDKL1Q00532 AC139887.3-201ENST00000568585 713 ntBASIC16.66■□□□□ 0.26
CDKL1Q00532 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.66■□□□□ 0.26
CDKL1Q00532 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CDKL1Q00532 MTDHP4-201ENST00000600287 670 ntBASIC16.66■□□□□ 0.26
CDKL1Q00532 AC007950.2-201ENST00000615045 2347 ntBASIC16.66■□□□□ 0.26
CDKL1Q00532 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDKL1Q00532 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDKL1Q00532 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDKL1Q00532 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDKL1Q00532 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDKL1Q00532 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.66■□□□□ 0.26
CDKL1Q00532 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.66■□□□□ 0.26
CDKL1Q00532 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDKL1Q00532 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDKL1Q00532 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.66■□□□□ 0.26
CDKL1Q00532 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDKL1Q00532 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.66■□□□□ 0.26
CDKL1Q00532 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CDKL1Q00532 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.66■□□□□ 0.26
CDKL1Q00532 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDKL1Q00532 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDKL1Q00532 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDKL1Q00532 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDKL1Q00532 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.65■□□□□ 0.26
CDKL1Q00532 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.65■□□□□ 0.26
CDKL1Q00532 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDKL1Q00532 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CDKL1Q00532 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.65■□□□□ 0.26
CDKL1Q00532 AC079328.2-201ENST00000561241 3354 ntBASIC16.65■□□□□ 0.26
CDKL1Q00532 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDKL1Q00532 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDKL1Q00532 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDKL1Q00532 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDKL1Q00532 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDKL1Q00532 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDKL1Q00532 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.65■□□□□ 0.26
CDKL1Q00532 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.65■□□□□ 0.26
CDKL1Q00532 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDKL1Q00532 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.65■□□□□ 0.26
CDKL1Q00532 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDKL1Q00532 TERC-201ENST00000602385 541 ntBASIC16.65■□□□□ 0.26
CDKL1Q00532 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDKL1Q00532 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDKL1Q00532 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDKL1Q00532 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDKL1Q00532 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDKL1Q00532 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDKL1Q00532 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CDKL1Q00532 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.65■□□□□ 0.26
CDKL1Q00532 AC006449.5-201ENST00000610658 2098 ntBASIC16.65■□□□□ 0.26
CDKL1Q00532 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDKL1Q00532 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CDKL1Q00532 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
CDKL1Q00532 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
CDKL1Q00532 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.64■□□□□ 0.26
CDKL1Q00532 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.26
CDKL1Q00532 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDKL1Q00532 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
CDKL1Q00532 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDKL1Q00532 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDKL1Q00532 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDKL1Q00532 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDKL1Q00532 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDKL1Q00532 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDKL1Q00532 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.64■□□□□ 0.25
CDKL1Q00532 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
CDKL1Q00532 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CDKL1Q00532 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDKL1Q00532 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
CDKL1Q00532 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDKL1Q00532 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.64■□□□□ 0.25
CDKL1Q00532 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.64■□□□□ 0.25
CDKL1Q00532 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CDKL1Q00532 KRT18P56-201ENST00000507275 550 ntBASIC16.64■□□□□ 0.25
CDKL1Q00532 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDKL1Q00532 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.64■□□□□ 0.25
CDKL1Q00532 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms