Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CBX1P83916 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.68■□□□□ 0.42
CBX1P83916 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CBX1P83916 AC004817.3-201ENST00000602957 2129 ntBASIC17.68■□□□□ 0.42
CBX1P83916 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC17.68■□□□□ 0.42
CBX1P83916 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CBX1P83916 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CBX1P83916 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CBX1P83916 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CBX1P83916 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CBX1P83916 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CBX1P83916 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.68■□□□□ 0.42
CBX1P83916 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.68■□□□□ 0.42
CBX1P83916 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.68■□□□□ 0.42
CBX1P83916 Z85996.1-201ENST00000494644 937 ntBASIC17.68■□□□□ 0.42
CBX1P83916 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CBX1P83916 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CBX1P83916 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CBX1P83916 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CBX1P83916 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC17.68■□□□□ 0.42
CBX1P83916 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CBX1P83916 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CBX1P83916 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC17.68■□□□□ 0.42
CBX1P83916 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.68■□□□□ 0.42
CBX1P83916 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CBX1P83916 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CBX1P83916 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CBX1P83916 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CBX1P83916 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CBX1P83916 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CBX1P83916 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
CBX1P83916 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.67■□□□□ 0.42
CBX1P83916 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CBX1P83916 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.67■□□□□ 0.42
CBX1P83916 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CBX1P83916 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CBX1P83916 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CBX1P83916 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CBX1P83916 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CBX1P83916 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.67■□□□□ 0.42
CBX1P83916 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CBX1P83916 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CBX1P83916 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CBX1P83916 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.67■□□□□ 0.42
CBX1P83916 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CBX1P83916 LSM12P1-201ENST00000411836 588 ntBASIC17.67■□□□□ 0.42
CBX1P83916 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.67■□□□□ 0.42
CBX1P83916 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.67■□□□□ 0.42
CBX1P83916 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.67■□□□□ 0.42
CBX1P83916 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.67■□□□□ 0.42
CBX1P83916 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CBX1P83916 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC17.67■□□□□ 0.42
CBX1P83916 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CBX1P83916 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC17.67■□□□□ 0.42
CBX1P83916 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CBX1P83916 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CBX1P83916 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CBX1P83916 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.67■□□□□ 0.42
CBX1P83916 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CBX1P83916 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CBX1P83916 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CBX1P83916 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CBX1P83916 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CBX1P83916 ABR-228ENST00000574437 3196 ntTSL 5 BASIC17.67■□□□□ 0.42
CBX1P83916 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CBX1P83916 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC17.66■□□□□ 0.42
CBX1P83916 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC17.66■□□□□ 0.42
CBX1P83916 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC17.66■□□□□ 0.42
CBX1P83916 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CBX1P83916 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CBX1P83916 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CBX1P83916 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CBX1P83916 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CBX1P83916 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CBX1P83916 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.66■□□□□ 0.42
CBX1P83916 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC17.66■□□□□ 0.42
CBX1P83916 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.66■□□□□ 0.42
CBX1P83916 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC17.66■□□□□ 0.42
CBX1P83916 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CBX1P83916 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.66■□□□□ 0.42
CBX1P83916 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CBX1P83916 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC17.66■□□□□ 0.42
CBX1P83916 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CBX1P83916 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CBX1P83916 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CBX1P83916 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.66■□□□□ 0.42
CBX1P83916 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.66■□□□□ 0.42
CBX1P83916 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.66■□□□□ 0.42
CBX1P83916 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.66■□□□□ 0.42
CBX1P83916 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CBX1P83916 AC011767.1-201ENST00000617410 1153 ntBASIC17.66■□□□□ 0.42
CBX1P83916 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CBX1P83916 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CBX1P83916 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CBX1P83916 AC232323.1-201ENST00000540724 2099 ntBASIC17.66■□□□□ 0.42
CBX1P83916 REXO1L5P-201ENST00000622260 2098 ntBASIC17.66■□□□□ 0.42
CBX1P83916 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC17.66■□□□□ 0.42
CBX1P83916 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CBX1P83916 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CBX1P83916 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms