Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.51■□□□□ 0.07
CDC42P60953 AC024909.3-201ENST00000611513 2257 ntBASIC15.51■□□□□ 0.07
CDC42P60953 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CDC42P60953 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDC42P60953 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDC42P60953 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDC42P60953 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDC42P60953 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDC42P60953 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDC42P60953 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDC42P60953 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDC42P60953 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDC42P60953 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.5■□□□□ 0.07
CDC42P60953 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.5■□□□□ 0.07
CDC42P60953 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDC42P60953 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDC42P60953 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CDC42P60953 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.5■□□□□ 0.07
CDC42P60953 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
CDC42P60953 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.5■□□□□ 0.07
CDC42P60953 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.5■□□□□ 0.07
CDC42P60953 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CDC42P60953 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDC42P60953 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDC42P60953 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC15.5■□□□□ 0.07
CDC42P60953 AL359075.1-203ENST00000462729 1002 ntBASIC15.5■□□□□ 0.07
CDC42P60953 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.5■□□□□ 0.07
CDC42P60953 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC15.5■□□□□ 0.07
CDC42P60953 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC15.5■□□□□ 0.07
CDC42P60953 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.5■□□□□ 0.07
CDC42P60953 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.5■□□□□ 0.07
CDC42P60953 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC15.5■□□□□ 0.07
CDC42P60953 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.5■□□□□ 0.07
CDC42P60953 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CDC42P60953 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.5■□□□□ 0.07
CDC42P60953 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.5■□□□□ 0.07
CDC42P60953 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.5■□□□□ 0.07
CDC42P60953 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDC42P60953 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.5■□□□□ 0.07
CDC42P60953 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDC42P60953 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDC42P60953 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDC42P60953 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.5■□□□□ 0.07
CDC42P60953 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDC42P60953 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.5■□□□□ 0.07
CDC42P60953 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDC42P60953 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDC42P60953 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
CDC42P60953 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CDC42P60953 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDC42P60953 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CDC42P60953 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CDC42P60953 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDC42P60953 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDC42P60953 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDC42P60953 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDC42P60953 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDC42P60953 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.49■□□□□ 0.07
CDC42P60953 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDC42P60953 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDC42P60953 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDC42P60953 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDC42P60953 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CDC42P60953 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.49■□□□□ 0.07
CDC42P60953 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.49■□□□□ 0.07
CDC42P60953 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDC42P60953 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDC42P60953 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CDC42P60953 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CDC42P60953 FAM220CP-201ENST00000395253 831 ntBASIC15.49■□□□□ 0.07
CDC42P60953 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
CDC42P60953 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC15.49■□□□□ 0.07
CDC42P60953 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDC42P60953 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CDC42P60953 DET1-205ENST00000558413 583 ntTSL 4 BASIC15.49■□□□□ 0.07
CDC42P60953 AL441883.1-201ENST00000566170 1045 ntBASIC15.49■□□□□ 0.07
CDC42P60953 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDC42P60953 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC15.49■□□□□ 0.07
CDC42P60953 AL390719.2-201ENST00000606993 987 ntBASIC15.49■□□□□ 0.07
CDC42P60953 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
CDC42P60953 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
CDC42P60953 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.49■□□□□ 0.07
CDC42P60953 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDC42P60953 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CDC42P60953 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.49■□□□□ 0.07
CDC42P60953 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CDC42P60953 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDC42P60953 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDC42P60953 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.49■□□□□ 0.07
CDC42P60953 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDC42P60953 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.49■□□□□ 0.07
CDC42P60953 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.49■□□□□ 0.07
CDC42P60953 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CDC42P60953 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CDC42P60953 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDC42P60953 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.48■□□□□ 0.07
CDC42P60953 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CDC42P60953 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.48■□□□□ 0.07
CDC42P60953 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.48■□□□□ 0.07
CDC42P60953 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms