Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AF228730.7-201ENST00000641842 219 ntBASIC17.59■□□□□ 0.41
CDH6P55285 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.59■□□□□ 0.41
CDH6P55285 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.59■□□□□ 0.41
CDH6P55285 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDH6P55285 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.59■□□□□ 0.41
CDH6P55285 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDH6P55285 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDH6P55285 HLA-A-202ENST00000376806 1854 ntBASIC17.58■□□□□ 0.41
CDH6P55285 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.41
CDH6P55285 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.58■□□□□ 0.41
CDH6P55285 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.58■□□□□ 0.41
CDH6P55285 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
CDH6P55285 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDH6P55285 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CDH6P55285 LINC00895-201ENST00000629028 1637 ntBASIC17.58■□□□□ 0.41
CDH6P55285 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.58■□□□□ 0.41
CDH6P55285 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDH6P55285 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDH6P55285 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CDH6P55285 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDH6P55285 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
CDH6P55285 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDH6P55285 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDH6P55285 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDH6P55285 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CDH6P55285 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDH6P55285 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDH6P55285 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDH6P55285 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
CDH6P55285 KRT18P27-201ENST00000427733 1299 ntBASIC17.58■□□□□ 0.4
CDH6P55285 TPM4P1-201ENST00000436100 807 ntBASIC17.58■□□□□ 0.4
CDH6P55285 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.58■□□□□ 0.4
CDH6P55285 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.58■□□□□ 0.4
CDH6P55285 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CDH6P55285 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CDH6P55285 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.58■□□□□ 0.4
CDH6P55285 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.58■□□□□ 0.4
CDH6P55285 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
CDH6P55285 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CDH6P55285 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
CDH6P55285 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDH6P55285 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CDH6P55285 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.58■□□□□ 0.4
CDH6P55285 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDH6P55285 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDH6P55285 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDH6P55285 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDH6P55285 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CDH6P55285 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDH6P55285 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
CDH6P55285 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDH6P55285 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDH6P55285 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.58■□□□□ 0.4
CDH6P55285 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDH6P55285 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.58■□□□□ 0.4
CDH6P55285 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDH6P55285 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDH6P55285 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH6P55285 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.57■□□□□ 0.4
CDH6P55285 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH6P55285 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDH6P55285 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH6P55285 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH6P55285 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH6P55285 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH6P55285 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
CDH6P55285 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH6P55285 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.57■□□□□ 0.4
CDH6P55285 AC002310.6-201ENST00000624451 1377 ntBASIC17.57■□□□□ 0.4
CDH6P55285 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH6P55285 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH6P55285 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDH6P55285 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.57■□□□□ 0.4
CDH6P55285 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.57■□□□□ 0.4
CDH6P55285 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDH6P55285 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDH6P55285 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CDH6P55285 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH6P55285 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDH6P55285 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.57■□□□□ 0.4
CDH6P55285 AC073621.1-201ENST00000392730 636 ntBASIC17.57■□□□□ 0.4
CDH6P55285 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.57■□□□□ 0.4
CDH6P55285 HNRNPDP1-201ENST00000439535 754 ntBASIC17.57■□□□□ 0.4
CDH6P55285 AC079781.3-201ENST00000449110 356 ntBASIC17.57■□□□□ 0.4
CDH6P55285 AF186996.4-201ENST00000467186 377 ntBASIC17.57■□□□□ 0.4
CDH6P55285 RPS15P9-201ENST00000494093 319 ntBASIC17.57■□□□□ 0.4
CDH6P55285 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.57■□□□□ 0.4
CDH6P55285 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.57■□□□□ 0.4
CDH6P55285 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH6P55285 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.57■□□□□ 0.4
CDH6P55285 AL031008.1-201ENST00000619963 541 ntBASIC17.57■□□□□ 0.4
CDH6P55285 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.57■□□□□ 0.4
CDH6P55285 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.57■□□□□ 0.4
CDH6P55285 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.57■□□□□ 0.4
CDH6P55285 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH6P55285 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.57■□□□□ 0.4
CDH6P55285 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.57■□□□□ 0.4
CDH6P55285 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH6P55285 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH6P55285 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms