Protein–RNA interactions for Protein: P55084

HADHB, Trifunctional enzyme subunit beta, mitochondrial, humanhuman

Known RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHBP55084 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HADHBP55084 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.65■□□□□ 0.42
HADHBP55084 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
HADHBP55084 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HADHBP55084 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
HADHBP55084 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HADHBP55084 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
HADHBP55084 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.65■□□□□ 0.42
HADHBP55084 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HADHBP55084 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HADHBP55084 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HADHBP55084 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.65■□□□□ 0.42
HADHBP55084 TSPY19P-201ENST00000418461 509 ntBASIC17.65■□□□□ 0.42
HADHBP55084 TSPY18P-201ENST00000441642 509 ntBASIC17.65■□□□□ 0.42
HADHBP55084 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.65■□□□□ 0.42
HADHBP55084 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.65■□□□□ 0.42
HADHBP55084 AC107918.2-201ENST00000530817 355 ntBASIC17.65■□□□□ 0.42
HADHBP55084 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.65■□□□□ 0.42
HADHBP55084 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
HADHBP55084 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.65■□□□□ 0.42
HADHBP55084 AL445228.2-201ENST00000605589 952 ntBASIC17.65■□□□□ 0.42
HADHBP55084 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.65■□□□□ 0.42
HADHBP55084 AL121772.3-201ENST00000610840 674 ntBASIC17.65■□□□□ 0.42
HADHBP55084 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.65■□□□□ 0.42
HADHBP55084 REXO1L6P-202ENST00000619970 1078 ntBASIC17.65■□□□□ 0.42
HADHBP55084 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.65■□□□□ 0.42
HADHBP55084 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
HADHBP55084 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
HADHBP55084 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HADHBP55084 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HADHBP55084 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.65■□□□□ 0.42
HADHBP55084 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
HADHBP55084 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HADHBP55084 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HADHBP55084 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
HADHBP55084 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.64■□□□□ 0.42
HADHBP55084 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
HADHBP55084 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
HADHBP55084 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
HADHBP55084 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
HADHBP55084 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.64■□□□□ 0.42
HADHBP55084 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.64■□□□□ 0.42
HADHBP55084 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HADHBP55084 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HADHBP55084 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HADHBP55084 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
HADHBP55084 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.64■□□□□ 0.41
HADHBP55084 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HADHBP55084 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HADHBP55084 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.64■□□□□ 0.41
HADHBP55084 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.64■□□□□ 0.41
HADHBP55084 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.64■□□□□ 0.41
HADHBP55084 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
HADHBP55084 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.64■□□□□ 0.41
HADHBP55084 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HADHBP55084 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.64■□□□□ 0.41
HADHBP55084 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.64■□□□□ 0.41
HADHBP55084 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HADHBP55084 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.64■□□□□ 0.41
HADHBP55084 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.64■□□□□ 0.41
HADHBP55084 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.64■□□□□ 0.41
HADHBP55084 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HADHBP55084 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.64■□□□□ 0.41
HADHBP55084 AC025062.2-201ENST00000605477 670 ntBASIC17.64■□□□□ 0.41
HADHBP55084 AC008608.2-201ENST00000606089 416 ntBASIC17.64■□□□□ 0.41
HADHBP55084 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HADHBP55084 AC093458.2-201ENST00000623150 629 ntBASIC17.64■□□□□ 0.41
HADHBP55084 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.64■□□□□ 0.41
HADHBP55084 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.64■□□□□ 0.41
HADHBP55084 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HADHBP55084 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.64■□□□□ 0.41
HADHBP55084 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.64■□□□□ 0.41
HADHBP55084 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
HADHBP55084 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
HADHBP55084 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.64■□□□□ 0.41
HADHBP55084 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.64■□□□□ 0.41
HADHBP55084 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HADHBP55084 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
HADHBP55084 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HADHBP55084 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
HADHBP55084 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HADHBP55084 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HADHBP55084 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
HADHBP55084 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.63■□□□□ 0.41
HADHBP55084 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
HADHBP55084 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HADHBP55084 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
HADHBP55084 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HADHBP55084 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HADHBP55084 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HADHBP55084 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
HADHBP55084 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HADHBP55084 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HADHBP55084 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HADHBP55084 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
HADHBP55084 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HADHBP55084 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.63■□□□□ 0.41
HADHBP55084 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
HADHBP55084 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HADHBP55084 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms