Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
HMGCS2P54868 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HMGCS2P54868 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HMGCS2P54868 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HMGCS2P54868 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HMGCS2P54868 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
HMGCS2P54868 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
HMGCS2P54868 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HMGCS2P54868 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HMGCS2P54868 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HMGCS2P54868 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HMGCS2P54868 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HMGCS2P54868 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
HMGCS2P54868 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HMGCS2P54868 GK-202ENST00000378941 458 ntTSL 3 BASIC19.35■□□□□ 0.69
HMGCS2P54868 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HMGCS2P54868 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC19.35■□□□□ 0.69
HMGCS2P54868 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC19.35■□□□□ 0.69
HMGCS2P54868 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
HMGCS2P54868 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC19.35■□□□□ 0.69
HMGCS2P54868 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC19.35■□□□□ 0.69
HMGCS2P54868 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC19.35■□□□□ 0.69
HMGCS2P54868 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HMGCS2P54868 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC19.35■□□□□ 0.69
HMGCS2P54868 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC19.35■□□□□ 0.69
HMGCS2P54868 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC19.35■□□□□ 0.69
HMGCS2P54868 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
HMGCS2P54868 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC19.35■□□□□ 0.69
HMGCS2P54868 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HMGCS2P54868 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HMGCS2P54868 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.35■□□□□ 0.69
HMGCS2P54868 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HMGCS2P54868 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMGCS2P54868 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
HMGCS2P54868 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMGCS2P54868 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.34■□□□□ 0.69
HMGCS2P54868 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMGCS2P54868 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC19.34■□□□□ 0.69
HMGCS2P54868 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HMGCS2P54868 GRAP-202ENST00000395635 834 ntTSL 2 BASIC19.34■□□□□ 0.69
HMGCS2P54868 PIN1P1-201ENST00000412108 996 ntBASIC19.34■□□□□ 0.69
HMGCS2P54868 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC19.34■□□□□ 0.69
HMGCS2P54868 LY6E-204ENST00000519546 971 ntTSL 2 BASIC19.34■□□□□ 0.69
HMGCS2P54868 MPI-209ENST00000564003 1195 ntTSL 2 BASIC19.34■□□□□ 0.69
HMGCS2P54868 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
HMGCS2P54868 AL662799.1-202ENST00000614205 422 ntBASIC19.34■□□□□ 0.69
HMGCS2P54868 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC19.34■□□□□ 0.69
HMGCS2P54868 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC19.34■□□□□ 0.69
HMGCS2P54868 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMGCS2P54868 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMGCS2P54868 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMGCS2P54868 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC19.34■□□□□ 0.69
HMGCS2P54868 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMGCS2P54868 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMGCS2P54868 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC19.34■□□□□ 0.69
HMGCS2P54868 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.34■□□□□ 0.69
HMGCS2P54868 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HMGCS2P54868 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HMGCS2P54868 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMGCS2P54868 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMGCS2P54868 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMGCS2P54868 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.33■□□□□ 0.69
HMGCS2P54868 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.33■□□□□ 0.69
HMGCS2P54868 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
HMGCS2P54868 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.33■□□□□ 0.69
HMGCS2P54868 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
HMGCS2P54868 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HMGCS2P54868 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
HMGCS2P54868 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HMGCS2P54868 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
HMGCS2P54868 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HMGCS2P54868 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HMGCS2P54868 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HMGCS2P54868 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
HMGCS2P54868 HLA-H-201ENST00000383620 1096 ntBASIC19.33■□□□□ 0.68
HMGCS2P54868 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
HMGCS2P54868 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC19.33■□□□□ 0.68
HMGCS2P54868 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC19.33■□□□□ 0.68
HMGCS2P54868 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HMGCS2P54868 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HMGCS2P54868 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC19.33■□□□□ 0.68
HMGCS2P54868 SPDYE22P-201ENST00000582158 798 ntBASIC19.33■□□□□ 0.68
HMGCS2P54868 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC19.33■□□□□ 0.68
HMGCS2P54868 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC19.33■□□□□ 0.68
HMGCS2P54868 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC19.33■□□□□ 0.68
HMGCS2P54868 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC19.33■□□□□ 0.68
HMGCS2P54868 AC025048.6-201ENST00000634326 1161 ntBASIC19.33■□□□□ 0.68
HMGCS2P54868 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HMGCS2P54868 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
HMGCS2P54868 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HMGCS2P54868 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
HMGCS2P54868 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HMGCS2P54868 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC19.33■□□□□ 0.68
HMGCS2P54868 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.33■□□□□ 0.68
HMGCS2P54868 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
HMGCS2P54868 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.33■□□□□ 0.68
HMGCS2P54868 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC19.33■□□□□ 0.68
HMGCS2P54868 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
HMGCS2P54868 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HMGCS2P54868 AL671710.1-201ENST00000610245 2349 ntBASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms