Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.23■□□□□ 0.19
EPHA4P54764 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.23■□□□□ 0.19
EPHA4P54764 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.23■□□□□ 0.19
EPHA4P54764 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.23■□□□□ 0.19
EPHA4P54764 TNRC18P3-201ENST00000441896 2691 ntBASIC16.23■□□□□ 0.19
EPHA4P54764 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
EPHA4P54764 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
EPHA4P54764 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
EPHA4P54764 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
EPHA4P54764 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
EPHA4P54764 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.23■□□□□ 0.19
EPHA4P54764 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
EPHA4P54764 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
EPHA4P54764 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.23■□□□□ 0.19
EPHA4P54764 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
EPHA4P54764 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
EPHA4P54764 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
EPHA4P54764 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.22■□□□□ 0.19
EPHA4P54764 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.22■□□□□ 0.19
EPHA4P54764 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
EPHA4P54764 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
EPHA4P54764 AC012313.1-201ENST00000593393 3059 ntBASIC16.22■□□□□ 0.19
EPHA4P54764 CROCCP2-202ENST00000412962 2773 ntBASIC16.22■□□□□ 0.19
EPHA4P54764 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.22■□□□□ 0.19
EPHA4P54764 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
EPHA4P54764 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
EPHA4P54764 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
EPHA4P54764 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
EPHA4P54764 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
EPHA4P54764 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
EPHA4P54764 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
EPHA4P54764 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
EPHA4P54764 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
EPHA4P54764 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
EPHA4P54764 AL139400.1-201ENST00000366220 510 ntBASIC16.22■□□□□ 0.19
EPHA4P54764 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
EPHA4P54764 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
EPHA4P54764 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.22■□□□□ 0.19
EPHA4P54764 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.22■□□□□ 0.19
EPHA4P54764 AC005237.2-201ENST00000434368 219 ntBASIC16.22■□□□□ 0.19
EPHA4P54764 AL592309.1-201ENST00000443127 649 ntBASIC16.22■□□□□ 0.19
EPHA4P54764 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.22■□□□□ 0.19
EPHA4P54764 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.22■□□□□ 0.19
EPHA4P54764 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.22■□□□□ 0.19
EPHA4P54764 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.22■□□□□ 0.19
EPHA4P54764 AC243562.1-201ENST00000560672 389 ntBASIC16.22■□□□□ 0.19
EPHA4P54764 AC025678.2-201ENST00000562061 970 ntBASIC16.22■□□□□ 0.19
EPHA4P54764 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.22■□□□□ 0.19
EPHA4P54764 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
EPHA4P54764 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.22■□□□□ 0.19
EPHA4P54764 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.22■□□□□ 0.19
EPHA4P54764 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
EPHA4P54764 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
EPHA4P54764 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
EPHA4P54764 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
EPHA4P54764 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
EPHA4P54764 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.22■□□□□ 0.19
EPHA4P54764 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.22■□□□□ 0.19
EPHA4P54764 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
EPHA4P54764 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
EPHA4P54764 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
EPHA4P54764 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
EPHA4P54764 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
EPHA4P54764 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
EPHA4P54764 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
EPHA4P54764 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.21■□□□□ 0.19
EPHA4P54764 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.21■□□□□ 0.19
EPHA4P54764 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
EPHA4P54764 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
EPHA4P54764 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.21■□□□□ 0.19
EPHA4P54764 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.21■□□□□ 0.19
EPHA4P54764 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
EPHA4P54764 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
EPHA4P54764 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
EPHA4P54764 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
EPHA4P54764 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
EPHA4P54764 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
EPHA4P54764 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.21■□□□□ 0.19
EPHA4P54764 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
EPHA4P54764 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
EPHA4P54764 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.21■□□□□ 0.19
EPHA4P54764 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.21■□□□□ 0.19
EPHA4P54764 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
EPHA4P54764 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.21■□□□□ 0.19
EPHA4P54764 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.21■□□□□ 0.19
EPHA4P54764 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.21■□□□□ 0.19
EPHA4P54764 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
EPHA4P54764 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
EPHA4P54764 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.21■□□□□ 0.19
EPHA4P54764 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
EPHA4P54764 KRT8P23-201ENST00000560090 1207 ntBASIC16.21■□□□□ 0.19
EPHA4P54764 AC004449.1-201ENST00000564240 433 ntBASIC16.21■□□□□ 0.19
EPHA4P54764 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
EPHA4P54764 MIR4492-201ENST00000581627 80 ntBASIC16.21■□□□□ 0.19
EPHA4P54764 CYP2A7P1-201ENST00000595391 815 ntBASIC16.21■□□□□ 0.19
EPHA4P54764 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
EPHA4P54764 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
EPHA4P54764 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
EPHA4P54764 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
EPHA4P54764 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms