Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC18.62■□□□□ 0.57
BRCA2P51587 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC18.62■□□□□ 0.57
BRCA2P51587 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.62■□□□□ 0.57
BRCA2P51587 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.62■□□□□ 0.57
BRCA2P51587 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BRCA2P51587 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BRCA2P51587 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.62■□□□□ 0.57
BRCA2P51587 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
BRCA2P51587 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BRCA2P51587 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.62■□□□□ 0.57
BRCA2P51587 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BRCA2P51587 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
BRCA2P51587 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BRCA2P51587 AC099336.1-201ENST00000417053 1171 ntBASIC18.62■□□□□ 0.57
BRCA2P51587 AC004408.2-201ENST00000623613 2777 ntBASIC18.62■□□□□ 0.57
BRCA2P51587 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
BRCA2P51587 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.61■□□□□ 0.57
BRCA2P51587 FXNP2-201ENST00000411625 547 ntBASIC18.61■□□□□ 0.57
BRCA2P51587 AC104989.1-201ENST00000519711 778 ntBASIC18.61■□□□□ 0.57
BRCA2P51587 C2orf69P2-201ENST00000562032 1123 ntBASIC18.61■□□□□ 0.57
BRCA2P51587 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
BRCA2P51587 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
BRCA2P51587 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
BRCA2P51587 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.61■□□□□ 0.57
BRCA2P51587 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC18.61■□□□□ 0.57
BRCA2P51587 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC18.61■□□□□ 0.57
BRCA2P51587 AC055876.2-201ENST00000531834 546 ntBASIC18.61■□□□□ 0.57
BRCA2P51587 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.61■□□□□ 0.57
BRCA2P51587 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC18.61■□□□□ 0.57
BRCA2P51587 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BRCA2P51587 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BRCA2P51587 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
BRCA2P51587 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
BRCA2P51587 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC18.61■□□□□ 0.57
BRCA2P51587 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC18.61■□□□□ 0.57
BRCA2P51587 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
BRCA2P51587 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC18.6■□□□□ 0.57
BRCA2P51587 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BRCA2P51587 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BRCA2P51587 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BRCA2P51587 AC007613.1-201ENST00000572811 2597 ntBASIC18.6■□□□□ 0.57
BRCA2P51587 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BRCA2P51587 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC18.6■□□□□ 0.57
BRCA2P51587 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC18.6■□□□□ 0.57
BRCA2P51587 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
BRCA2P51587 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC18.6■□□□□ 0.57
BRCA2P51587 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
BRCA2P51587 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC18.6■□□□□ 0.57
BRCA2P51587 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.6■□□□□ 0.57
BRCA2P51587 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BRCA2P51587 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.6■□□□□ 0.57
BRCA2P51587 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.6■□□□□ 0.57
BRCA2P51587 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BRCA2P51587 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.6■□□□□ 0.57
BRCA2P51587 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.6■□□□□ 0.57
BRCA2P51587 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BRCA2P51587 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.6■□□□□ 0.57
BRCA2P51587 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BRCA2P51587 FAM220BP-201ENST00000377689 816 ntBASIC18.6■□□□□ 0.57
BRCA2P51587 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.6■□□□□ 0.57
BRCA2P51587 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.6■□□□□ 0.57
BRCA2P51587 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BRCA2P51587 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC18.6■□□□□ 0.57
BRCA2P51587 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC18.6■□□□□ 0.57
BRCA2P51587 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BRCA2P51587 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
BRCA2P51587 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.6■□□□□ 0.57
BRCA2P51587 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
BRCA2P51587 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BRCA2P51587 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.6■□□□□ 0.57
BRCA2P51587 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
BRCA2P51587 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
BRCA2P51587 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
BRCA2P51587 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC18.59■□□□□ 0.57
BRCA2P51587 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC18.59■□□□□ 0.57
BRCA2P51587 COG4-212ENST00000564653 590 ntTSL 5 BASIC18.59■□□□□ 0.57
BRCA2P51587 AC105021.1-202ENST00000570572 669 ntBASIC18.59■□□□□ 0.57
BRCA2P51587 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BRCA2P51587 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
BRCA2P51587 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BRCA2P51587 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC18.59■□□□□ 0.57
BRCA2P51587 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
BRCA2P51587 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
BRCA2P51587 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
BRCA2P51587 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.59■□□□□ 0.57
BRCA2P51587 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
BRCA2P51587 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BRCA2P51587 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
BRCA2P51587 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC18.59■□□□□ 0.57
BRCA2P51587 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC18.59■□□□□ 0.57
BRCA2P51587 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
BRCA2P51587 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC18.59■□□□□ 0.57
BRCA2P51587 AL079307.3-201ENST00000556114 283 ntBASIC18.59■□□□□ 0.57
BRCA2P51587 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC18.59■□□□□ 0.57
BRCA2P51587 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC18.59■□□□□ 0.57
BRCA2P51587 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC18.59■□□□□ 0.57
BRCA2P51587 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.59■□□□□ 0.57
BRCA2P51587 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
BRCA2P51587 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BRCA2P51587 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms