Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
CPT1AP50416 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.58■□□□□ 0.57
CPT1AP50416 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CPT1AP50416 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CPT1AP50416 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CPT1AP50416 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CPT1AP50416 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
CPT1AP50416 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.58■□□□□ 0.56
CPT1AP50416 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.58■□□□□ 0.56
CPT1AP50416 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC18.58■□□□□ 0.56
CPT1AP50416 CRB3P1-201ENST00000449338 276 ntBASIC18.58■□□□□ 0.56
CPT1AP50416 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.58■□□□□ 0.56
CPT1AP50416 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CPT1AP50416 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC18.58■□□□□ 0.56
CPT1AP50416 SERBP1P5-201ENST00000510079 1181 ntBASIC18.58■□□□□ 0.56
CPT1AP50416 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC18.58■□□□□ 0.56
CPT1AP50416 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC18.58■□□□□ 0.56
CPT1AP50416 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CPT1AP50416 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CPT1AP50416 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.58■□□□□ 0.56
CPT1AP50416 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC18.58■□□□□ 0.56
CPT1AP50416 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.58■□□□□ 0.56
CPT1AP50416 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.58■□□□□ 0.56
CPT1AP50416 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CPT1AP50416 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CPT1AP50416 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CPT1AP50416 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CPT1AP50416 LINC02012-201ENST00000608206 1725 ntBASIC18.57■□□□□ 0.56
CPT1AP50416 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPT1AP50416 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CPT1AP50416 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.57■□□□□ 0.56
CPT1AP50416 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.57■□□□□ 0.56
CPT1AP50416 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CPT1AP50416 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC18.57■□□□□ 0.56
CPT1AP50416 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPT1AP50416 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CPT1AP50416 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPT1AP50416 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CPT1AP50416 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPT1AP50416 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPT1AP50416 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.57■□□□□ 0.56
CPT1AP50416 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CPT1AP50416 AC022144.1-201ENST00000602255 1580 ntBASIC18.57■□□□□ 0.56
CPT1AP50416 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.57■□□□□ 0.56
CPT1AP50416 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPT1AP50416 MRPS18AP1-201ENST00000414458 589 ntBASIC18.57■□□□□ 0.56
CPT1AP50416 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC18.57■□□□□ 0.56
CPT1AP50416 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.57■□□□□ 0.56
CPT1AP50416 TSSK5P-201ENST00000423978 907 ntBASIC18.57■□□□□ 0.56
CPT1AP50416 AL353705.2-201ENST00000428243 662 ntBASIC18.57■□□□□ 0.56
CPT1AP50416 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CPT1AP50416 HLA-V-204ENST00000476601 1289 ntBASIC18.57■□□□□ 0.56
CPT1AP50416 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC18.57■□□□□ 0.56
CPT1AP50416 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC18.57■□□□□ 0.56
CPT1AP50416 AL138828.2-201ENST00000615812 383 ntBASIC18.57■□□□□ 0.56
CPT1AP50416 GPER1-207ENST00000619052 571 ntTSL 2 BASIC18.57■□□□□ 0.56
CPT1AP50416 AL358472.5-202ENST00000641448 1267 ntBASIC18.57■□□□□ 0.56
CPT1AP50416 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPT1AP50416 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
CPT1AP50416 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPT1AP50416 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPT1AP50416 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPT1AP50416 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CPT1AP50416 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPT1AP50416 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CPT1AP50416 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPT1AP50416 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.57■□□□□ 0.56
CPT1AP50416 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPT1AP50416 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.57■□□□□ 0.56
CPT1AP50416 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CPT1AP50416 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CPT1AP50416 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CPT1AP50416 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CPT1AP50416 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CPT1AP50416 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CPT1AP50416 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.56■□□□□ 0.56
CPT1AP50416 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CPT1AP50416 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CPT1AP50416 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC18.56■□□□□ 0.56
CPT1AP50416 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CPT1AP50416 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CPT1AP50416 HNRNPA3P1-201ENST00000401429 1139 ntBASIC18.56■□□□□ 0.56
CPT1AP50416 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC18.56■□□□□ 0.56
CPT1AP50416 PIN1P1-201ENST00000412108 996 ntBASIC18.56■□□□□ 0.56
CPT1AP50416 GAPDHP21-201ENST00000450301 1010 ntBASIC18.56■□□□□ 0.56
CPT1AP50416 HNRNPA3P5-201ENST00000455201 833 ntBASIC18.56■□□□□ 0.56
CPT1AP50416 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CPT1AP50416 SATB1-217ENST00000493952 626 ntTSL 3 BASIC18.56■□□□□ 0.56
CPT1AP50416 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.56■□□□□ 0.56
CPT1AP50416 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC18.56■□□□□ 0.56
CPT1AP50416 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC18.56■□□□□ 0.56
CPT1AP50416 CECR7-204ENST00000609932 568 ntTSL 2 BASIC18.56■□□□□ 0.56
CPT1AP50416 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CPT1AP50416 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CPT1AP50416 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CPT1AP50416 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.56■□□□□ 0.56
CPT1AP50416 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CPT1AP50416 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CPT1AP50416 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CPT1AP50416 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms